Prionailurus viverrinus (fishing cat): 125166191
Help
Entry
125166191 CDS
T09889
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04014
Ras signaling pathway
pviv04015
Rap1 signaling pathway
pviv04024
cAMP signaling pathway
pviv04520
Adherens junction
pviv04530
Tight junction
pviv04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
125166191 (AFDN)
04015 Rap1 signaling pathway
125166191 (AFDN)
04024 cAMP signaling pathway
125166191 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125166191 (AFDN)
04530 Tight junction
125166191 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125166191 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
125166191
NCBI-ProteinID:
XP_047715930
LinkDB
All DBs
Position
B2:150791106..150933856
Genome browser
AA seq
1875 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNK
DDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAVRQ
ASEKDDRPFQGDDLENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLERRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDENGAKETILDDDECPLQIFREWPTDRGVLVFQLKRRPPDYVPKKTKKHV
DGKLVKGKERAEGSGYGSALPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFE
ENSIQLFGSGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGAS
HVFKFVDPSQDHAVAKRPVDGGLTAKGPRQKPGIVQETTFDLGGDVHSGAALPASKSATR
LDSDRALPAPSTAERGTVKPMLRLEQQDYRRQENRTQDALGPELILPASIEFRESSEDSF
LSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMME
GVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFK
YLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMALLRRCRVNAALTIQLFS
QLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQ
ATTLLTMDKYAPEDTPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPTDLIENVVAVAEN
TADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPNGLQEFLDPLCQRGFCRLI
PHARSPGTWTIYFEGADYESHLLRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGA
GQEKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLE
VAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPW
AEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAYAPGAAAKITSVSTGNLCTE
EQTPPPRPEAYPIPTQTYTREYFTFPASRSQDRVAPPQNQWPSYEEKPHVHTDGHQSGPA
MQRVTRSQEELREDKAYQLERHRLEAVLDRKSDSDVWIQPSSSVGSSTSSQEHLDPCSKS
GTPASTLTKSGPGRWKTPASAQPLLAAPPPAQTDLPPPPPPPPAHYTGDFDGIPVDLPLP
PPPSGQAAAERRKREEQQRWYEKEKARLEEERDRKRREQERKLGQMRSQALNPATFSPVT
VAHTKPEKPSTLQRPQDTVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKR
DAREKLEKQQQMHIVDMLSREIRELQSKPERSAEDSDRLRKLMLEWQFQKRLQESKQKDE
DDEEEEDDDVDTMLIMQRLEAERRARLQDEERRRQRQLDDMRRREAEDRARQEEERTKRD
AEDKRRQEEGYYSRLEAERRRQHAEAERRLLEPEEPGLGRPPLPRGYELPPPSSPAAAPP
PPPQRTASSLQAPALSPDSLYTARLVAYHEEEEEEDCSLAGQDKLSHTGRSRGRLPPAAP
APRPPPRRPRPASDGLFLSGSLQPPSAAAHGAAPGAGRPPPPPPKPPGSHHPRHSKGPNS
SVGSSGAVIGARDGSRDPRERLAKSHDADLPGNSGAPENLTFKERQRLFSQGQDVSNKVK
ASRKLTELENELNTK
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgcgacgaggagcggcggaagctggccgacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagcccaccgaggatttggagtttcat
ggcgtaatgagattttattttcaagataaagctgctggaaactttgcaacaaaatgcatt
cgggtctctagtacggccaccacgcaagacgtgatcgagacgctggcagagaaattccgc
cctgacatgcggatgctgtcgtcccccaagtactccctctacgaagtccacgtcagcgga
gaagaaagaagattggatgtagatgagaaaccccttgttgtgcagttgaattggaataaa
gacgatcgagagggcagattcgttctcaagaatgagaacgatgcccttcctcctaagaag
gctcaaagcaatggacctgaaaagcaggagaaagaaggtgttatccagaacttcaagaga
actctctccaagaaagagaagaaggagaaaaagaagagagagaaagaggcagtgaggcag
gcatctgagaaagatgatcggcctttccaaggggatgacctcgagaattcccgactggcc
gccgaggtttacaaagacatgcccgagaccagcttcactcgcacgatctccaaccccgag
gtggtcatgaagcgccggcggcagcagaagctggagaggcggatgcaggagttccggagc
tcggatgggcggccggactcaggtggaacactgagaatttatgcagatagcttaaaaccg
aacattccctacaagacaatcctgctgtccaccacggatcccgctgactttgctgtggcc
gaggctctagagaaatatggtctggagaaggagaaccctaaagattactgcatcgcccgg
gttatgctgcctcctggagcccagcattcggatgaaaacggtgctaaagaaacgatcctc
gatgatgacgagtgtcctttacagatcttcagggagtggccaactgaccgaggggtttta
gtctttcagttgaagaggaggccgccagactacgtcccgaagaaaacgaagaaacatgtc
gacgggaagctggtgaaagggaaggagagagccgagggttccggctacggctcagcgctt
ccgcctgagaagttgccctacctggtggagctcagcccagatggttctgactccagggac
aagcccaagctttaccgccttcagttgagcgttactgaggtcgggacagagaagttcgag
gagaactccatccagctgtttggatcaggaattcagccccatcactgtgacctcacaaac
atggatggagttgtcaccgtgactccgaggagcatggacgccgagacgtacgtggaagga
cagcgcatctccgagacaaccatgctgcagagtgggatgaaagtgcagtttggggcgtca
cacgtgttcaagtttgtggaccccagccaggaccacgcagtggccaagagacccgtggat
ggaggcctgacggccaagggccccagacagaagcctggaattgttcaggagacaactttc
gatttggggggagatgttcacagcggggcagcgctgccagcgagcaagagcgccaccagg
ctggacagcgacagggcactgcctgcccccagcacggccgagcgcgggacagtgaagccg
atgctgagactggagcagcaggactaccggcggcaagaaaacagaactcaggatgctctt
gggcctgaactcatactgcctgcaagcattgaattcagggaaagttctgaagattcattt
ttatctgccattataaattatactaatagctctacagtccattttaagttgtcacctaca
tatgtattatatatggcatgtcggtatgtattgtcgagccagtacagacccgatgtcagt
cctacagagcgtactcacaaagtgattgccatagtcaacaagatggtgagcatgatggag
ggggtgattcaggaagtagaccaggttgatcagaaacagaagaatatcgcaggggcactt
gctttctggatggccaatgcatctgagcttctcaacttcattaagcaggaccgagatctt
agtcgaatcacattggacgcccaagatgttttagcacacttggttcaaatggcgtttaaa
tatctggttcattgtcttcagtcagaactgaataactacatgccggcttttctggatgac
cctgaagagaacagtctacaaagaccaaaaatagatgacgtcttgcacacgctcacggga
gcgatggcgctgctgaggcgctgcagggtcaatgctgctctgaccatccagcttttctct
cagctcttccacttcatcaacatgtggctcttcaacagattggtgaccgaccccgagtcg
ggactgtgctctcactattggggggcgatcatccgccagcagctggggcacgtggaagcc
tgggcagagaagcagggattagagctggcggccgactgtcacctgagccggatagtgcag
gcgaccactttgctcaccatggataaatacgctcctgaggacaccccaaatatcaacagc
acctgctttaagttaaattcactgcagctgcaggccttgctacagaattaccactgtgcg
cccgatgagccctttatccccacggacctgatagagaatgtcgtggccgtggccgaaaac
acggccgacgagctggcacgcagtgatgggcgggaggtgcagctggaagaggaccctgat
ctgcagctgccttttcttttgccggaagacggctattcttgtgacgtcgtcaggaacgtt
ccaaacggtttacaagaatttctggaccctctgtgccagagagggttttgcaggttaatt
cctcatgcacgttcaccaggtacttggacgatatattttgaaggtgcagattatgagagc
catcttctgcgtgagaacacagagctggctcagcctctgcggaaagaacctgaaataatc
actgtgactctcaaaaagcaaaacggaatgggcctcagcattgtcgcggcaaagggtgct
ggtcaagagaaactcggaatctatgtcaagtctgtcgtaaaaggaggtgctgcagatgtg
gatgggcgcctggccgcaggtgaccagctcctcagtgtggatggacgaagtctggtagga
ctctctcaagaaagggcagcagaactcatgacaaggaccagttccgtggtgacactggaa
gtagccaagcaaggagccatctaccacggcctggccaccctgctcaaccagccgtccccg
atgatgcagagagtttcagaccgtcgtggctcagggaaaccccgaccaaagagcgaaggt
ttcgagctctataacaattcagctcaaaacgggtcacccgagagccctcagctgccttgg
gcggaatacagcgaaccgaagaagctccctggcgatgacaggctgatgaagaaccgggct
gaccaccgctccagccccaacgtggcaaatcagccccccagtcccggagggaaaagcgcg
tacgcccctggagcagccgctaagatcacgtccgtctccaccggaaacctctgcactgag
gagcagacccctccacctcgacctgaggcctaccccatccccacccagacgtacaccagg
gagtacttcaccttcccggcctccaggtcccaggaccgcgtggctccccctcagaaccag
tggcccagttacgaggagaagccgcacgtacacacagatggtcaccagtccggccccgcg
atgcagcgcgtcacccgctcccaggaggaacttcgggaggataaagcttaccaactcgag
cggcatcggctggaggcggtgctggatcgcaagtccgacagcgacgtgtggatccagccg
agctcctcggtgggctccagcacgtccagccaggagcacctggacccctgctccaagtcg
ggcacccccgcctccacgctgaccaagagcggccccgggcgctggaagacgccggcctcc
gcgcagcccctgctggcggcccccccgcccgcgcagacggacctgcccccgccgcccccg
ccgccccccgcgcactacaccggagacttcgacgggatccccgtggacctgcccctcccg
ccccctcccagcggccaggcggcggcggagcggaggaaacgggaggagcagcagcgctgg
tacgagaaggagaaggcccgcctggaggaggagcgggacaggaagcgccgggagcaggag
cggaagctgggccagatgcgctcccaggccctgaacccggccacgttctccccggtgacc
gtcgcgcacacgaagccggagaaaccttccacgctccagaggccccaggacacggtcatc
cgggagctgcagccccagcagcagccacgcaccatcgagcgccgagacctgcagtacatc
acggtcagcaaagaggagctgtcctcaggggacagcctgtcccccgacccctggaagcgg
gacgcccgggagaagctggagaagcagcagcagatgcacatcgtggacatgctgagcagg
gagatccgggagctccagagcaagcccgagcgcagcgccgaggacagcgaccgcctgcgc
aagctcatgctggagtggcagttccagaagagactgcaggagtccaagcagaaggacgag
gacgacgaggaggaggaggacgacgacgtggacaccatgctgatcatgcagcgcctcgag
gctgagcggagagcaaggttacaggacgaggagcggcggcggcagcggcagctggacgac
atgcgcaggcgggaagcggaggaccgcgccaggcaggaggaggagaggacgaagcgagac
gccgaagacaagaggcgacaggaagaaggttattacagccgcctggaagccgagaggcgc
agacagcacgcggaggccgagcgcaggctgctggagccggaggagccgggcctgggcaga
ccgccgctgccgcggggctacgagctcccgcccccgtcctccccggcggctgctcctcct
cccccacctcagcggaccgcctcctccctgcaggccccggccctgtccccagactccctg
tacaccgccaggctcgttgcgtaccacgaggaggaggaggaggaggactgcagtctggca
ggtcaggacaagctctcccacaccggcaggtcccggggccgccttcctcccgccgcccct
gcgccacggccacccccccgccggccgcgcccggcctccgacggcctctttctctccggc
tccctgcagcccccctcggccgctgcccacggtgctgctcccggagcaggccggccccct
cctccccctccaaagccaccgggctcccaccacccccgccactcgaaaggaccaaactct
tccgtgggatcttccggggcagtgatcggtgcccgtgacggctcccgggacccgagagag
aggctggcgaaaagccatgatgcagatttacctggaaattccggagcccctgagaacttg
acattcaaagagcgccagcggctgttctcacaaggtcaagatgtgtccaataaagtgaaa
gcctctcgtaaattaacagaactggaaaacgaactgaacacaaagtga
DBGET
integrated database retrieval system