KEGG   Prionailurus viverrinus (fishing cat): 125166677
Entry
125166677         CDS       T09889                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pviv  Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pviv03400]
    125166677 (MDC1)
DNA repair and recombination proteins [BR:pviv03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125166677 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 125166677
NCBI-ProteinID: XP_047716619
LinkDB
Position
B2:complement(29152693..29167790)
AA seq 1925 aa
MVMEDTQAINWEVEEEEEKEIPSESLGCSLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGR
MPDCSVILPFSSISKQHAVIEILAWDKAPVLQDCGSLNGTQVLRPPKVLSPGMSHRLRDQ
ELILFADLPCQYHRLNVPLPFVSRGPLTIEETPRVQGRTQPQGLLLAEDSEEEVDSPSER
CVVKEPRTCPLAAVVPESDEEGPSPAPDGPGPPFAFNLDSDTDEEESQHPASGKASSTAR
RGSTAETKQSTAMATEIQLEKNQCSVKERNNDTEVERDARNGVVPLGVILERNQPAGEDS
DTDVDDENRPPGRPAVVHLERAQPSDFIDSDTDVEEEEIPATPAVVPMKKRQIFHGISTG
SPRTHALVHLQESPTGSDTDMGEGEIQLAVPLERSRASVVIDSNTDGEEEVLAALALAHL
KESRATTWNRDTDLEEDRAQPVALREQNQTSTGRDSDTDMEEEGLPMEKRGTVFKGHTDK
AYSEKRQPPPQNSDLGVDKDKSSLGVHLERSQASATVDINIQVKEKVPPESAVLLVEKHQ
VPVVWTDQTDVEVEEGQAKLPVMHLEEAQPPSGDCETDVEGISLAASVVADTRKSQLPAE
EDAGAKRAVAVLEHKRDLEARAQGGSLVSQVEQDHLPVSREDINDLVVTGTSGESSQPQR
EGAQTSIEREREPHMDRTQDSGDNHGDSEDLDLQATQCFVERDNQNLEAQSMEDEATQAF
LVTLPQEPGPSCYSFQDTGTLDEPWEVLATQPFCPRESEAPEPEPIVGPLDAHGSCLSTP
WTIPQGQNPGSPVHIEPLGIQDKGMQTMEKDMGIPREAAEGVAPERGPLDRETENLPSGE
QEDVIGEEELTRGIQVLARDTQGQESDQKVKIASIKRNMESLNVEIEITREIQEKEIEKQ
ILAREIFERETEKLVLEREGEPNGLGVEVPEVILERGPQRGETEKGSQDQEGQASSPTLE
LETGTGGHQGLASASVASGSQSGGGEGVPMSPRRQQRGHLTCEVPPAEKAFGGDQESRDA
CQPPAVPEASAPHQNPLLFQSQKHPVPQPFCSSSPSSLEPIPRTRQNRNQKVPETPLPKS
KVRLRGSSRKTPSPVSSVALEPHTAIPTDQPLSAEPTSQVTRGRRRRSSVKTPELVVPTA
PELQPSTSKDQPVTPELTSRITRGRTQRFSVKAPEVVVPTAPDVQPSTSKDQSVAPELIS
QDRTHKFVKTPELVISTASQLQPSTSKGQFVLTESVSGATQGRARRSCVKTPKAIVPTAP
ELQPSTSKDQPVTPEPTSRVTRGRTRGSSVKIPPESTVPTAPELQPTTSKDQSVLTEPTS
GATHSRIPRSSVKIPELVVPTAPEVQSSIPTDQSVTPKPTSQRRTSRSFVKTHEPTVPTA
PELQSTTPKGQSVTPKRKSQGRTPRSSSKTPKPVVPTVPELQASTPTDEPVTPKLTPRAT
RGRTQRSLVKTPEPVVPTASELQPSISTDQPVTPEPTFRATRGRIHRSSVKIPQPIESTA
SDLESLNPIDQLVTPKAIAEGGQGKTLRSTVSAVPVLTTHESQNPDPIGQPVPPEPIPQA
NCSRKRRATRKHGSFTAPIVHEPHSAPPEPNSRSSKNQRRAVRAVESLRTIPEPALAQPP
EAPTHATQIQKVEAAGRSEFTPEPQSKPSQSRKRPLATVDSPPLQKRLQQKTVSLHKEEE
DSAESPRKDEVAVIPGPGKRKRDQTEEEPRGIPSRSLRRVKPNQESTAPKVLFTGVVDAR
GERAVLALGGSLASSVAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLP
PDEYVVTDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGT
VLPSMPHSYKPQRVVITCSQDFSRCSIPFRVGLPILSPEFLLTGVLKQEAKPEAFILSTL
EMSSS
NT seq 5778 nt   +upstreamnt  +downstreamnt
atggtcatggaagacacccaagctattaactgggaggttgaggaagaggaggagaaagag
atacccagtgaatccttggggtgtagcttggagcccgtaggacgactgcatatcttcagt
agtgcccatggaccagaaaaagatttccctctgtatctcgggaagaatatggtaggccga
atgcctgattgctctgtgatcctgcccttttcatccatctccaaacaacatgcagtgatt
gaaatcttggcctgggacaaggcacctgtccttcaagattgtggcagcctcaatggtact
caagtcctaaggcctcctaaggtcctaagcccagggatgagtcatcggctgagggatcag
gagttgattctctttgctgacttgccctgccagtaccatcgcctgaatgttcccctgccc
tttgtttcccggggccctctaactatagaagagacacccagggtacagggacgaactcaa
ccccagggactcctgttggctgaggactcagaggaggaagtagattctccttcagaaagg
tgtgtggtgaaagaaccaagaacctgccctctagctgcagtggttccagagagtgatgaa
gaggggccttcccctgccccagatggccctgggccaccttttgcattcaacctggacagt
gacacagatgaggaagaaagtcaacatccagcatcaggaaaggcctcctcaactgccaga
agaggctccactgcagagacaaaacagtctacagctatggcaactgaaatccagcttgaa
aagaatcagtgttcggtaaaagagagaaacaatgacacagaagttgaaagggatgcaagg
aatggggtggtcccacttggggtgatactggagaggaaccaacctgctggggaagacagt
gacacagatgtggatgatgagaacaggcctccaggaaggcctgctgtggtccatttggaa
agggctcagccttctgacttcatagacagtgatactgatgtggaagaagaagagatccct
gcaaccccagctgtagttcctatgaagaagaggcaaatcttccatggaattagtacaggg
agtcctcggacacatgccttggtacatctacaggagagcccaactggtagtgatacagat
atgggggaaggtgagatccagctggcagtccctctagagagaagccgagcctctgtggtg
attgacagcaatacagatggtgaggaagaagtcttagcagcactcgctttggcacatctg
aaagagagccgagccactacatggaacagagatacagatttggaagaggatagggcccaa
cctgtggcccttcgggagcaaaaccaaacctctactgggagagacagtgacacagacatg
gaggaggaggggctcccaatggaaaagagaggaactgttttcaagggtcacacagacaag
gcatattcagaaaagaggcaacctcctccccaaaacagtgatctaggggtggacaaagat
aagagctcacttggggtccatctggagagaagccaagcctctgccacagtggacatcaac
atacaagtgaaggagaaagtgccaccagagtcagctgttctacttgtggagaagcatcag
gtgcctgtggtatggacagatcaaacagatgtggaagtagaagagggccaagcgaagctg
cctgtgatgcatctagaggaagcccaacctccatctggggactgtgagacagatgtggag
ggcatatccttagcagcttcagtggtggcagatacaagaaagagccagcttccagcagaa
gaggatgctggggcaaagagggctgtagctgttcttgagcacaagagagatcttgaggcg
agggcccagggtgggtcacttgtgtcacaggtggagcaggatcacctccctgtctcaagg
gaggatattaatgatctggtggtcacaggcacttcaggggaatccagccagccacagaga
gagggagcccagacctccatagaaagggagagagaaccacatatggacaggacccaggac
tctggagacaaccacggtgattctgaagacctggacctacaggctacccagtgctttgtg
gagagagacaatcagaatctggaagcccagagcatggaggatgaagccacccaggcgttt
ctggttactctaccccaagagcctggtccttcctgctatagcttccaggatacaggtacc
ttggatgagccgtgggaggtcttggcaacacagccattctgtccgagagagtctgaggcc
cctgagcccgagcccattgttggtcctcttgatgcccatggatcctgcctctctacacct
tggacaataccacaaggccaaaatccaggaagcccagttcacatagagccattggggatt
caggacaaagggatgcagactatggagaaagacatggggataccaagagaagcagcagag
ggggtggcccctgagagaggaccattggacagggaaactgagaacctgccatcaggagaa
caagaagatgtgataggagaagaagagttaaccagagggatacaggtgttagctagagat
actcaaggacaagagtctgaccaaaaggtgaaaattgcaagtattaaaagaaatatggag
agtttgaacgtagaaattgagataaccagggaaatacaagagaaagaaatagaaaagcag
attcttgcaagagaaatatttgagagagaaacagagaaactagtactagagagagagggt
gagccaaatggattaggagttgaggtaccggaagtaatactggagagaggcccacagaga
ggggagactgagaaagggagccaggaccaggaagggcaagcctccagtccaacactagag
cttgaaacagggacaggcggtcaccagggacttgcttcagcctcagtagcttctgggagc
cagtcaggtggaggagagggagtcccaatgagccccaggaggcagcagagaggccacttg
acttgtgaggtgccacctgctgagaaggccttcgggggtgatcaggaatccagagatgct
tgtcagcctcctgcagtgcctgaagcttcagccccacaccaaaaccccctcctctttcag
agtcaaaaacatcctgtgcctcagcccttctgttcttcctctccatcttctttagagccc
attcccaggaccaggcaaaacaggaatcagaaagttccagagactcccttgccaaaatcc
aaagtcaggctccgagggtcctccaggaagacaccctctccagtttcttctgtagccctt
gaacctcatactgccattcccacagaccaacccctcagtgctgagcccacatctcaggtc
actcggggcaggagacgtaggtcctctgtgaagacccctgaactggttgtccccacagcc
cctgagctccagccttccacttccaaagaccagcctgtcacccctgagctcacatcgcgg
atcactcggggtaggacacaaaggttctctgtcaaggcccctgaagtagttgtccctaca
gcccctgatgttcagccttccacctctaaagaccagtctgtcgctcctgagctcatatct
caggacaggacacataaatttgtaaaaacccctgaactggttatttccacagcctctcag
ctccagccttccacctccaaaggccagtttgtcctcactgagtctgtatctggggctact
cagggcagggcacgtaggtcttgtgtcaagactcccaaagcaattgtccccacagcccct
gagctccagccttctacttccaaagaccagcctgtcacccctgagcccacatctcgagtc
actcgaggcaggacacgtgggtcctctgtcaagatccctcctgaatcaactgtccccacg
gcccctgaactccagcctaccacctccaaagaccagtctgtcctcactgagcccacatct
ggggccactcatagcaggatacctaggtcttctgtcaagattcctgagctagttgtccca
acagctcctgaagtccagtcttccatccccacagaccagtctgtcacccccaaacctaca
tctcagcgcaggacatccaggtcttttgtcaagacccatgaaccaactgttcccacagcc
cctgagctccagtctaccacccccaaaggccagtctgtcacccccaaacgtaaatctcag
ggcaggacacccaggtcttctagcaagacccccaaaccagttgtccccacagtccctgag
ctccaggcttccacccccacagacgagcctgtcactcccaaactcacacctcgggccact
cggggcaggacacaaaggtccttggtcaagacccctgagccagttgtccccacagcctct
gagctccagccttccatctccacagatcagcctgtcacccctgagcctacatttcgggcc
actcggggaaggatacataggtcctctgtcaagatcccccaaccaattgaatctacagcc
tctgaccttgaatctctcaaccccatagatcaactggtcacccctaaggctatagctgag
ggtggtcagggtaagacactaaggtctacagtaagtgctgtgccagttcttaccacccat
gaatcccagaatcctgaccccataggccagcctgttccccctgagcccatccctcaagcc
aactgcagcaggaagcggagggccacaaggaagcatgggtccttcacagctcccattgtc
catgagccccactctgcaccccctgaacctaactctcgatcctcaaagaaccaaagacga
gcagtgagagcagtggagtctcttaggaccattcccgagcctgctcttgcccagcctcct
gaggcccccactcatgctacccagatccaaaaggtagaggcagcaggcagatctgagttc
accccagagccccagtctaagccctctcagagccgcaagaggcctttggctactgtggat
tcacccccacttcaaaaacggctccaacagaagactgtgtccctccacaaagaggaagaa
gattcagcagagagcccaaggaaggacgaggtggcagtgattccaggaccaggcaagaga
aagagagaccaaacagaggaggagcccaggggaatcccaagccgcagccttcggcgggtc
aaacctaaccaagagtccacagcacccaaagtactcttcacaggtgtggtggatgcccgt
ggagaacgggcggtgctggccctgggtgggagtctggccagctcagtggcagaggcttcc
cacctggtgactgatcgagtccgccgcacggtcaagttcctgtgtgccctggggcggggg
atccccatcctctccctggactggctgcaccagtcccgcaaggctggttgcttcttgccc
ccggatgaatatgtggtgactgatcctgagcaggagaagaactttggcttcagccttcga
gatgccctgagccgggctcgggagagaaggttgctagagggctatgagatccatgtgact
ccaggagtccagccaccaccacctcaaatgggagagatcatcagctgctgtggaggcact
gtcctacccagcatgccccactcctataagcctcagagagttgtgattacatgctcccag
gacttctctcgatgctctattccatttcgggttgggctgcccattctctcacctgagttc
ctgctgacaggagtgctgaagcaggaagccaagccagaggccttcatcctctccactttg
gaaatgtcatcctcgtga

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