Prionailurus viverrinus (fishing cat): 125167360
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Entry
125167360 CDS
T09889
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125167360 (SAMD4A)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125167360 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
125167360
NCBI-ProteinID:
XP_047717349
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All DBs
Position
B3:97644819..97863435
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AA seq
718 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRSRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINASNWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQNTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGNLRIPLQELHQMILTPIKAYSS
PSTTPEACRREPQAPHPPSLMGPEGQTPDCKDSAAATGATATASAGASGGLQPHQLSSCD
GELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKK
RLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTPSSVGGGMGRRNPRQYQ
IPSRNVPSARLGLLGTSGFVSSTQRNTTANPAIMKQGRQNLWFANPGGSNSMPSRTHSSV
QRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctgtctctgcttaagcgcgtgagccagacccaggcccgtttc
ctccagctctgcctggagcactcgctggccgactgcgccgagctgcacgtcctcgaaggc
gaggccaacagccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcacctgcctttgctgaagccaggaaacctcgatgcaaaagttgag
tatatgaaactgctgcccaaaatcctggcgcactctattgaacacaaccagcacattgag
gagagcaggcagctgctgtcctatgctttgatacatccggccacttcgttggaagaccgc
agtgctttagccatgtggctgaaccacttggaggaccgcacgtcgaccagcttcggcggc
cagaaccgaagccgctcagactctgtggattatgggcagactcactactatcaccaaaga
cagaactccgatgacaagctcaatgggtggcagaactctcgggattcggggatttgcatc
aacgcctccaactggcaggacaaaagcctggggtgtgagaacggccatgtgcccctctac
tcctcttcatctgtccccaccacaatcaatacgattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaacactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggttaaaaagcctccgcctgcacaagtac
gctgcgcttttctcccagatgacctatgaggaaatgatggcccttactgagtgccagctg
gaggctcagaatgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagaaaggcaaaacctcctgaagtctttggaaagggacatcatcgaagggggcaacctg
cgcatcccgctccaggagctgcaccagatgatcctgactcccatcaaggcctacagctcc
ccaagcaccacccccgaggcttgccgccgggagccccaggccccccacccgccctcactg
atgggccctgagggccagacccctgactgcaaagacagtgccgcagccactggtgccaca
gccaccgcctccgctggggccagcggtgggctccagccacaccagctgagtagctgtgat
ggggagctggccgtcgcccccctgccggagggggatctccctgggcagttcacacgtgtc
atggggaaagtgtgcacacagctcttggtctccagacctgatgaggaaaatataagttcc
tatttacagctcatagacaagtgtctaattcatgaggcatttacagagactcagaaaaaa
agattgttgtcatggaaacagcaggtgcagaagctctttcgttctttccctcggaaaacc
cttctagacatatcaggatatcgacagcaaagaaatcgcggctttgggcagtccaactcc
ctcccgacacccagctctgtaggcggtggtatgggcagacggaacccacgccagtaccag
atcccctcccggaacgtcccttctgcccgccttggccttttgggtaccagtggatttgtc
agctctacccagcgcaacaccacagccaaccccgccatcatgaaacaaggaagacagaac
ctctggtttgccaatcctgggggcagcaacagcatgccaagccgcacccacagctcagtc
caaaggacccgctcgttgcctgtgcacacttctccacagaatatgctgatgttccagcag
ccagaattccagcttcctgtgactgaacctgacatcaacaataggctggagtccttgtgc
ctcagtatgaccgagcacgccctgggagacggggttgaccggacctccacaatctag
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