Prionailurus viverrinus (fishing cat): 125167363 Help Entry 125167363         CDS       T09889                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism pviv  Prionailurus viverrinus (fishing cat) Pathway pviv05014   Amyotrophic lateral sclerosis pviv05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:pviv00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     125167363 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     125167363 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pviv03400]     125167363 (SPG11) DNA repair and recombination proteins [BR:pviv03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      125167363 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  125167363 NCBI-ProteinID:  XP_047717358 LinkDB All DBs Position B3:54315827..54404443 Genome browser AA seq 2444 aa AA seqDB search MAAEEAAGRAASWGSCSSKAMERVLPMLLVPVPAEATRRLGSRAQLHREQEVLGSLTAAG SLQVLSLAPSGRSGGACCLNGPFRHFVWDESHKSSSPTDKPKLLALSENYELFIYEFNLK DGRCDATILYSCSEETLQKLIEDQNISISILSLRILSFHDNTSLLLINKCIIIHLIFPER DAEVGVCSCFTLPLPAQAVDRIIDTQLCRGILFVLSSLGWIYIFDTVDGRHVAHVDLALH QEDMCDEQQQEPAKVSSFTSLKVSQDLDVVVIISSSNSAIALNLNLYFRQHPGHLLCERT QEDMPVEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKSSNLEVSYCAP WFQNILHLESPESGNPSTSMPGWAFIPPDIMHNQYNFPQKDHAKTRDPGRSWKTMHIHEQ EEPIELKCMSVTGFSALFTWAVERTGCTIVLWDLETQGLQCFSLGQKCIPIDSCGDQQLC LVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ LDTVDFFLKSKENLLNPSSKSSVPDQLDHFPSHLYLKNVEKLTPALDLLCSAIRESDSET QSKHFSEQLLNLTLSFLNKQIKELFLHNEELDEHLQQGVNILTSYINELRTFMIKFPWKI IDTVDEYDVNENVPKVRESDIWKKLSVEDIIADAILNNRIPEAQAFFRINSHSAQRLEEL IRIGLNLVFDNLKKNNIKEASELLKNMGFDVKDQLLKICFYTTDKDIRDFLVEILKEKNY FSENEKRTIDFVHQVEKFYSGHFQENVQIQPFARYRMKEQDFFKHKSVLDSLLKHDPKDK FNKQDHRVVLNWAQWWNQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWSSIILWIG EFQTQNSCASLQQNRWPLLTVDVIDQNTCCNNYMRNEILDKLARSGIFLQSELEDFELFL LRLNRIGGVMQDTLPVQNYRSKEGWDFHSHFILYCLEHSLQYLLYVYLDRYKLNPSNCPF LEKSELYEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT LLALATTMYAPGGVSQVVQNDENETCLKKVDPQLLKMALTPYPKLKTALFPQYTASNVLP PDITLYHLMQSLLPFDPSRLFGWQSANTLAIGDAGSHLPHFSSPDLVNKYAIVERLNFAY YLQHGRPSFAFGTFLVQELTKSKTPKQLVQQVGNEAYVLGLSSFYIPSIAAACVCFLELL GLDSLKLRVDMKVANIILSYKCRNEDAQYSCVRESLAEKLSKLAMGEKATTEELLILLEE GIWSSIQQQEINRISSESSSQWALVVQFCRIHNVKLSTSYLRECAKANDWLQFIIHSQLH NYHPEEVKSLLQYFSPVLEDHLRLAFENLPLVSNSRRDSDQVCNRSPQEFQGNKEEMTDL FEVLLQCSEEPNSRSWLLAEAVKQQAPILSVLASCLQGASTIPCLCVWIITSVEESVAAE ATGHIQGSVEGHMWELQDLSVIWKTLLTRRKSKTLIRGFHLFLKDSPLLLMMEMYELCMF FKNYKEAEVKLLEFEKSFETVETTATRVHATIPAAWLKEQVCFLLKLMLQQCGTQYELGK LLQLFVGIEHLFCDGPDVKKLCVLSKILKDTSIAINPVVISSYSPENFQHECRSILEKLE TEGQFALARRVAELAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIGFWKKCHENFKRN SISSKAASSFFSAQAPEACECPAEGALSSIEEAHLLLTLAAHWLAQEGLVPVDELEELEK RIWLCRIAQHTLRENPEETEPRFSQQISTSGELSFESVASEFSISMLATLNTSKYLELNG LPSKETCDNTLGRKEQESLNFLIGRLLDDGCVHEASRICRYFHFYNQDVALVLHCRALAS GEASVGDLHPEVHAVLQSAELPEEEEPGMPLRKARSTSSLDSQSLVMLPPRDEVVTNLET LTSKCLHGKNYCRQVLCLYELAKELGCSYADVAARDGEAMLRTILASQRPDRCKRAQAFI STQGLEPDTVAELVAEEVTRELLTPSEGTGLKQMFTPAEESQTFLQLTTLCQDRTLVGMK LLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGISRVLQAARLLTDKHLAPSEEYGLM VRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHN MIALCFSMCREIGENHEAAACIQLKLIESQPWEDRLKDGYHLKQLLLKALTLMLDAAESY AKDSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHRLMDCISALPRFYQASIVAE AYDFVPDWAEILYQQVIVKGDFNYLEEFKQQRLLRSSVFEEISKKYKQHQPTDTAVKNLK KLLTYCEDVYLYYKLAYEHKFYDIVNMLLKDPQTGCCLKDMLAG NT seq 7335 nt NT seq  +upstreamnt  +downstreamnt atggctgcagaagaagcagccggcagggctgccagctggggcagttgcagctctaaagcc atggagcgggttctacctatgttgttggtgccagtcccagcggaggcaacacggcggctg ggatcccgggcacagttgcacagagagcaggaggttctggggagcctaacagctgcaggc agcctgcaagtgctttccttggcgccgagcggccggagtgggggtgcctgctgcctcaat ggtccctttcggcactttgtatgggacgagtctcataagagcagctcaccaacagacaag cccaaactgcttgctcttagtgagaattatgaactgtttatctatgaatttaatttgaaa gatggaagatgcgatgcaaccattttgtatagctgtagtgaggagacattgcaaaagctc attgaagatcaaaatatcagtatttccatattgtctttgagaattctgtcatttcacgat aacacttcactattgctcatcaacaaatgtatcatcatacaccttatatttcctgaaaga gatgctgaggttggagtatgcagctgttttacattacccttgcctgcacaggcagtggac aggattattgacacgcagctctgcagaggaattctctttgttttgagtagtttaggctgg atctacatatttgacactgtggatggtagacatgtagctcatgtggatttagcacttcac caagaagatatgtgtgatgagcagcaacaggagccagccaaggtttcttcgtttacttcg ctgaaagtgtctcaggacctagatgttgtggtgattatcagctcttccaactctgcaatt gctcttaacttaaatttgtatttcaggcaacacccaggacacctactatgtgaaagaact caagaagacatgcctgttgaaggccctaaggggatagatgaggatgatcctgttaattct gactacaacatgaaactgaccaagttttcctttcaagttgataggtcttggaaagcccag ctatcatcattgaatgaaacaataaagagttccaacctggaggtttcctattgtgctccg tggttccagaatattttgcatttggagtctcctgaatctggtaaccccagtaccagtatg ccaggctgggccttcattccaccagacataatgcacaaccagtataattttccacagaaa gatcatgccaagaccagggatccaggaagatcgtggaaaacaatgcacattcatgaacaa gaggaacctattgagcttaaatgtatgtctgtgacaggattcagtgcactgtttacttgg gcagtggaaaggacgggctgcaccattgtcctttgggatttggagacccagggcctgcag tgcttttcccttggccaaaagtgtattcctatagacagttgtggagaccagcaactctgc cttgttttgacagaaaacggactgtctctgattttgtttggattgactcaggaggaattt ttaaatagactaatgatccatggaagtgccagtactgtggactctctttgccatctcaat ggttgggggagatgctcaatccccatccatgcactggaggctgggatagaaaatcgtcag ctggacacagtagatttctttttgaagagcaaagaaaatcttttgaatccatcctcaaaa tcttctgtacctgatcagttggatcattttccatctcatttatatttaaaaaacgtggaa aagctgacaccagccttggatttactttgctcagcaattagagaaagtgattctgaaacc caaagcaaacacttttcagaacagttgcttaatcttacactgtcttttcttaacaaacaa ataaaggagctttttcttcacaatgaagaactagatgaacatctacagcagggagtgaac attttgaccagctacattaatgaacttcgaaccttcatgataaagtttccttggaagata atagataccgtagatgaatatgatgtaaatgaaaatgtccccaaagtaagagaaagcgat atatggaagaaactcagtgttgaggacattattgccgatgctattttgaacaacagaata ccagaggcacaggctttcttcaggattaacagtcattctgctcaaagacttgaggagctg attagaataggcctaaatttggtctttgacaatttgaaaaagaacaacataaaggaagcc tctgaacttttgaagaacatgggctttgatgtaaaagaccagttgctcaagatctgcttc tatacaactgataaagatatacgggactttttggttgaaattttaaaagaaaaaaattat ttttctgaaaatgaaaagagaactatagacttcgtgcatcaagttgagaagttttattca ggacattttcaagaaaatgtgcagatccagccctttgccaggtataggatgaaggaacag gattttttcaagcataaatctgttttggactcactcctgaaacatgatcctaaagataaa tttaacaaacaggaccacagagttgtgttaaattgggctcagtggtggaatcaactaaca caagaatccatccttctccccaggataagtccagaagagtacaaatcatattctcccgaa gccctctggagatacctcacagctcgccatgattggtcaagcattatcttgtggattgga gaatttcagacccagaacagttgtgcttcacttcagcagaacagatggccccttctgact gttgatgttattgatcagaatacttgctgcaacaactacatgaggaatgaaattttagat aagctggccaggagtgggatttttcttcagtctgaactagaagactttgaactcttcctc ctaagactgaaccgcattggaggtgtgatgcaagatactctccccgttcaaaactacagg tccaaagaaggttgggatttccattctcacttcattctctattgtttggaacacagtctg cagtatcttctctatgtctatcttgaccgttacaaacttaatccttcaaattgtcccttt ttggaaaaaagtgaattatatgaagcgcacccttggtttgaatttttagttcagtgtcga caagtttccagtaatttaacagatcccaaattgatcttccaggctagccttgcaaatgct cagatactgattcccagcaaccaggccagtgtaagcagtatgctgttggaaggacatact ctcctggcccttgctactacaatgtatgcccctgggggtgtcagccaggttgttcagaat gatgaaaatgagacctgtttgaagaaagtagatccccagttactgaagatggcattaact ccttatcccaagctaaaaactgctctattcccacagtatactgcctctaatgtcctgcca cctgatattacactttaccaccttatgcagtcattattgccctttgatcctagcagattg tttggctggcaatctgccaacacactggctataggagatgcagggagtcatctcccgcat ttttctagccctgacctggttaataagtatgctatagtggaacgtctgaattttgcttat tatttacaacatggacggccttcgtttgcatttggtacttttctggtccaggaattaacc aagagcaagactcccaagcagctggtccagcaagtaggcaatgaagcctatgttttagga ctctcctccttctacataccttcaatagcagctgcgtgtgtttgtttcttagaactgctt ggcctcgacagcctaaagctcagagttgatatgaaagtggccaatataattttgagctac aagtgtagaaatgaagatgctcagtacagctgtgtcagagagtctctagctgaaaaacta tctaaactggctatgggtgaaaaggcaaccacagaagaattgcttattctcttagaagaa ggtatatggagcagcattcagcagcaggaaataaataggatatctagtgaatctagcagc cagtgggcattagtggtacagttctgcaggatccacaatgtgaaactgagcacatcttat ctcagagaatgtgccaaagcaaatgattggttacagttcattattcacagtcaactccat aactatcacccagaggaggtgaaatctcttcttcaatatttcagtcctgtccttgaagac cacttaagattggcttttgagaacttgcccttagtgtccaactccaggagggacagtgat caagtctgcaacaggtccccccaggaattccagggaaacaaagaagagatgactgatctc tttgaagttctgctccagtgctcggaggagccaaactccaggtcctggctcctagctgaa gcggtgaaacaacaggcccctatccttagtgtcttggcctcatgtctccagggtgccagt actattccttgtctctgtgtttggatcatcacatctgtggaggagagtgttgcagccgaa gcaacaggacacattcagggctcagtggagggccacatgtgggagcttcaagacctctca gtcatctggaaaacattattaacaaggcggaagagcaaaactctcatcagaggtttccac cttttcttgaaggattccccactactgttgatgatggagatgtatgaactatgcatgttc tttaagaattataaggaagctgaagttaaacttctggagttcgaaaaaagctttgagact gttgaaacaacagccacaagggtccatgctaccatccctgctgcgtggctgaaggagcag gtgtgttttcttttgaagcttatgctgcagcagtgtgggacccagtatgaactggggaag cttttacagctatttgttggaatagaacatctcttctgtgatggtccagatgtgaagaag ctctgtgtccttagcaaaattttgaaggatacatccatagccattaatcctgtagttatt agcagctacagccctgagaattttcagcatgaatgcagatctattttggaaaaactggag acagagggacagtttgctttggccaggagggtagcagaattagctgagctacctgtggac aacttggttattgaagagataacacaggaaatgcagaccttaaaacacattgaccagtgg tccctgaaacaagcaagaattggcttctggaaaaaatgtcacgagaattttaagagaaat tccatttcaagcaaagcagcttcctcctttttctcagcccaggcccctgaggcatgtgag tgcccagctgagggggcactgagcagcattgaggaggcccatctgctgctgacactggct gcacactggcttgctcaggagggcctggtgcccgtggacgagctggaggagctggagaag cggatctggctctgccgcatcgcccagcacaccctcagggaaaacccagaggaaacagag cccaggttttctcaacagatctcaactagtggggaactttcctttgaaagcgtagcgagt gagttttcaatctccatgttggccactctgaacacatcaaaatacttagaacttaatggc cttccatccaaagagacttgtgataacacactgggtcggaaggagcaggaatcgctgaac ttcctgatcgggcgcctgttggacgatggctgtgtgcacgaagcaagtagaatatgtcga tattttcatttctataaccaagatgttgccttggtgttgcactgcagagcactggcttca ggggaagctagtgtgggtgacctgcacccagaagtccatgctgtcctgcaaagtgctgag ctgcctgaggaggaagaacctggcatgccactaaggaaagcccggagcacttcaagtttg gatagtcagtcacttgtgatgctgccccccagggatgaagtggtgactaatctggaaact ctgacaagcaaatgcctccatgggaagaactactgtcggcaggtcctgtgtctgtatgaa cttgccaaggagttgggctgttcctatgcagatgtggccgctcgggatggtgaggccatg ctcaggacgatcttggcctctcagcggcccgaccgatgcaagcgggcccaggctttcatc agcacccagggcctcgagccagacacagtggctgaacttgtggccgaagaggtgacccgg gagctgctgaccccatcggagggaacaggacttaagcagatgttcaccccagcagaggaa agccagacatttcttcagctgaccactctgtgtcaagaccgcacgttggtaggcatgaag ctattagacaagatttcctccgttccccatggggagttgtcttgcaccacggagctgctg atcctggcccatcactgcttcacgctgacatgccacatggagggcatcagccgagtcctg caggctgcccggctgcttacagacaaacacttggcccccagtgaggagtatgggctgatg gtgcgcctgctcactggcattggaaggtacaatgagatgacctacatatttgatttgctg cataaaaagcactactttgaagtgctgatgaggaagaagttggatccgagcggtaccctg aagacagccctgctggactacatcaaacgctgtcgcccgggagacagtgagaagcacaac atgattgctctgtgcttcagcatgtgccgggagatcggggagaaccacgaggcagctgcc tgcatccaactgaaattgatcgagtctcagccctgggaggaccgcctcaaggacgggtac cacctgaagcagctgctgctgaaagccctgactctgatgctggatgcagcagagagttat gccaaggactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataaca ctgcagattcactttctgaacactggccagaacacaatgctcatcaacctgggccgccac aggctgatggactgcatcagtgctctacctcggttctaccaggcttctattgtggctgag gcctatgactttgttcctgattgggctgaaattctataccaacaagtgattgttaaagga gactttaattacttggaagaatttaagcagcaaaggttattaagatctagtgtatttgaa gagatttcaaaaaaatacaaacagcatcagcctactgacacagctgtgaaaaacctgaag aagttactcacttattgtgaagatgtctacttgtattacaaacttgcatatgaacacaaa ttttatgacattgtaaatatgcttctgaaggaccctcaaactggctgctgtctaaaggac atgctagcaggttag

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