Prionailurus viverrinus (fishing cat): 125167543
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Entry
125167543 CDS
T09889
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125167543 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pviv00536
]
125167543 (COL23A1)
Glycosaminoglycan binding proteins [BR:
pviv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125167543 (COL23A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125167543
NCBI-ProteinID:
XP_047717763
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Position
A1:92169896..92524655
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AA seq
542 aa
AA seq
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MSPGQRAGGDARKGGPAGGCGGGGHPATTAGAWAVSALCLLLSVGSAAACLLLGAQAAAL
QGRVAALEEERDLLRRGGPPGDLAAWAEPHLERLLHEKLEGLVKHRTVREAPTECVCPPG
PPGRRGKAGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQDG
AAGPPGPPGPPGVRGPPGDTGKDGPRGAQGPEGPKGEAGRDGEMGLKGPPGPKGEPGIPG
KKGDDGTPSQPGLPGPPGPKGEPGSVGPPGENGVDGAPGPKGEPGQEGADGATGLRGPPG
LKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGA
KGDPGEVGPAGPKGEAGEMGLSGLPGADGPKGEKGESASDNLRESLAQIIVEPGPPGPPG
PPGPMGLQGIQGPKGLDGAKGEKGVSGERGPSGLPGPAGPPGLIGLPGTKGEKGRPGEPG
LDGFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCW
HK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgggccagcgcgccggcggcgacgcgcgtaagggcggcccggcgggcggctgc
ggcggcggggggcaccccgcgacgacggccggggcctgggcggtgagcgcgctgtgcctg
ctgctctctgtgggctcggcggccgcctgcctgctgctgggcgcccaggcggccgcgctg
cagggccgggtggcggcgctcgaggaggagcgggatctgctgcggcgcggggggccgccg
ggcgacctggccgcctgggccgagccgcacctggagcgcctgctgcacgagaagttggag
ggactggtcaagcaccggacggttcgggaagcgccgaccgagtgtgtctgccccccagga
ccccccggacggcgcggcaaggctggaagaagaggcgaccctggtcctcctgggcaatca
ggacgagatggctacccggggccactgggtctagatggcaagccgggacttccaggcccc
aaaggggaaaagggtgcaccaggagacttcggccctcggggagaccaagggcaagacgga
gctgctgggcctccggggccccctggaccccctggggtccgaggccctcctggcgacact
gggaaagatggccccaggggagcacaaggcccagagggtcccaaaggagaggctggacga
gacggcgagatgggcctgaagggacccccagggcccaagggtgagcctggcattcctgga
aagaagggagatgacgggacgccaagccagccagggctccctggacccccagggcccaag
ggcgagccagggagtgtggggcctccaggagaaaacggtgtggacggcgccccagggcca
aagggagagcctggccaggaaggtgccgatggagccacagggctgcggggtcccccgggc
ctcaagggcgagcaaggagacacagtggtgattgactacgatggcaggatcttggatgcc
ctgaagggtcctcccgggccacaggggcccccagggccaccagggatccccggagccaag
ggcgagctgggactgcctggtgccccgggaatcgatggagagaagggtcccaaaggagct
aaaggtgacccaggagaggtggggccggccggacccaaaggggaggcaggcgagatgggt
ctgtcgggcctcccgggcgccgacggccccaagggggagaagggagagtcggcatctgac
aacctacgggagagcctggctcagatcatagtggagccagggcccccaggcccccctggt
cccccaggccccatgggccttcagggaatccagggtcccaagggcttggacggagcaaag
ggagagaagggcgtgtcaggagagagaggccccagcggcctgcctgggccagctggcccg
ccgggccttattggactgccaggaaccaaaggagagaagggaagacccggggagccgggc
ctggatggtttccctggaccccgaggagagaaaggtgaccggagcgaacgtggagagaag
ggggagcgaggagtcccgggccggaaaggtgtgaagggccagaagggtgagccgggacct
ccaggcctggaccagccgtgtcccgtgggccctgatgggctgcccgtgcctggctgctgg
cataagtga
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