Prionailurus viverrinus (fishing cat): 125167561
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Entry
125167561 CDS
T09889
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125167561 (RPAP1)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125167561 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
125167561
NCBI-ProteinID:
XP_047717795
LinkDB
All DBs
Position
B3:57104749..57122352
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AA seq
1394 aa
AA seq
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MLSRPKPGESEVDLLRFQSQFLAAGAAPAVQLVKKGSRRGGDTNLDHPLLQDHRDVVTLD
NLPDLPPALVPAPPKRARPSPGRPLPEHEDPEERLNRHDQHITAVLTKIVERDTSSVAVN
LPVPSGVAFPPVFHRSQERQGKSATSGKRSIFAQEVAAKRVSEARVPPVREVVSTLDPLE
GAASCEAFTPREQGYQLPWGSHSFQGPSLVTGKGLRSQDAEQEAQTIHEENIAKLQAMAP
EEILQEQQRLLAQLDPNLVAFLRSHSHVHEQAGEKATEEQRPGGPSVEFTGEEPIVPTSP
SEPRQEDELEPEAPALAPPVTPHKEWLHMDTVELEKLQWTQDLPPLRRQQTQERMQARFS
LQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISR
AQAGEFGDRLVGSVLRLLLDAGFLFLLRFSLDDRVDAVIAAAVRALQALLVAPGDEELLD
SSFSWYHGALTFPLMPSQEDREDDEDEDEEAPAEKAKRKSPEEGNRPPSDLARHDIIKGL
LATNLLPRLRYVLEVTCPGPSVVLDILAVLIRLARHSLESATRVLECPRLIETVVREFLP
TSWSPMGVGPVLSLHKVPCATAMKLLRVLASAGRNIAARLLSSFDLRSRLCRFIAEAPQE
MALPPEEAEMLSTEAFRLWAVAASYGQGSDLYRELYPVLMRALQAVPEELSTQPPQPLSV
QRIASLLTLLTQLTLAASSTVPESSSDSAEASLSATPSLITWTQVSGLQPLVEPFLRQTL
KLLPRSENWHALGPVPTACLLFLDAYYQAWSQQPSLCPGDWLQDMERLSEGLLLPLLHPP
TLGTLWDSLGCCSPLCNPQFCVPAPEALPSLVSLGCTGGRPSLSLAGSASPFPFLTALLS
LFNTLARIHKGLCGQLAAILAAPGLQNYFLQCVAPMAAPQLTPFSAWALRHEYHLQYLAL
TLAQRAATVQPVLAVNAALHHSMVLALLSRLLPGSEYLAHELLLSCVFRLEFLPERASGG
PEAADFSDLLSLGSGRDSASGRGALLVQACQDLPSIRSCYLTHCSLARANLLASQALYRR
ELRQIPALLLPVPKEPLLPTDWPFLPLIHLYHQASDTPSGLPPADTVGTAMRALQWVLVL
ESWRPQALWAVPPAARLARLMCVFLVDSELFRETPIQRLVAALLARLCQPKVLPDLKLDC
PLPGLTSFPDLYANFLEHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRAL
GLPLTQLPVSLEYYTEPPEDNLALLQLYFRVLVTGALCARWCPVLYAVAVAHVNSFIFSQ
DPKSSDEVKAARRSMLQKTWMLTNEGLRQHLLHYKLPNPALPEGFELYLQLPSLRQQYLQ
RLASGILQNGESET
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccagaccaaagccaggggagtcagaggtggacctgctgcgtttccagagtcag
tttcttgcagctggtgcggctccagcagtacaactggtgaagaaaggaagtaggagaggt
ggcgacactaacctggaccatcctctgctacaagatcatcgggatgtggtgacgctggac
aatctcccagatttgcccccagctttggttcctgctcccccgaagagagccagacccagc
cctggccgtcccctgcctgaacatgaggatcctgaagagaggctgaacaggcacgatcaa
cacatcactgctgtcttgactaagatcgttgaacgagatacaagttcagtggctgtgaat
ctgcctgtgcccagtggtgttgctttccctcctgtgttccatcgctcacaggagagacag
gggaagtcagcaacatctggtaagagaagcatctttgcccaagaagttgcagcaaagaga
gtgtctgaagctagggtcccaccagttagagaagttgtgtctaccctggatccactagag
ggtgctgcatcctgtgaggcattcacacctagggagcagggctaccagcttccatggggc
agccacagcttccagggacccagtctagtcacagggaaggggctcaggagccaggacgct
gagcaggaagcccagaccatccatgaagagaacatagcaaaactacaagccatggctcct
gaagagatcctgcaggaacagcagcggctcctagctcagcttgatcccaacttggttgcc
ttcttgaggtcccacagccatgtccatgagcaagcaggagagaaagccacagaggagcag
agaccaggaggaccctctgttgagttcactggagaggaacccattgtgccaacttctcca
agtgagcccaggcaggaagatgagctggagccagaagccccagctctggcaccacctgtg
acgccccacaaagaatggcttcacatggacactgtggagctggagaagctccagtggacc
caggacttgcccccactccggcggcagcagacgcaggagaggatgcaggcccgatttagt
cttcagggagagcttctggcccctgatgtggacctgcccacccatctgggcctgcaccac
catggagaagaggcagagagagcgggatactccctgcaggagctgttccacctcacgcgc
agccaggtgtcccagcagagagcactagcgctgcatgtgttggcccaggtcatcagcagg
gcccaggctggcgagtttggggaccggctagtgggcagtgtcttgcgcctcctcttggat
gctggtttcctcttcttgctgcgcttctccctggatgacagagtggacgcagtaattgca
gctgccgtccgggctcttcaggctctgctggtagcccctggagatgaggaactcctcgat
agctccttctcctggtaccatggagctttgacgtttcctctgatgcccagccaggaggac
agggaggacgatgaggatgaagatgaagaggccccagcagaaaaagcaaaaagaaagagc
cctgaggaaggaaaccggcctccatctgacctggcccgacatgacatcatcaaggggctt
ctggctaccaacctgctgccacggctgcgctatgtgctagaggtgacctgcccaggccct
tctgtggtccttgatatcctggctgtgctcatccgtctggcccggcattccctggagtca
gccacaagggtcctggagtgccctcgactaatagagaccgtggttcgagagtttctgccc
accagctggtcccccatgggggtggggcctgtcctcagtctacacaaagtgccctgtgcc
actgccatgaaactacttcgtgtcctggcctcggctggtaggaatattgctgcccggctg
ctgagcagctttgatctccggagccgcctgtgccgctttatagcagaggctccccaggaa
atggccttgcccccagaggaagctgagatgctgagcactgaggctttccgtttgtgggct
gtggctgcctcctatggccagggtagtgacctttacagggagctatacccagtgctgatg
cgggccctgcaggctgtgccagaggagctcagcacccagccccctcagcccctgtctgtg
cagcggatagcctccttgctcactctgctcacccagctgaccctggcagccagtagcact
gtccctgagtccagcagtgactctgctgaggccagtctgtcggccaccccttccttgatc
acttggacacaggtgtcggggctccaaccccttgtggagccctttctaagacagaccttg
aagttgctgcccagatctgagaattggcatgctctaggcccagttcccactgcctgccta
ctcttcctggatgcatactaccaggcctggagccagcagccaagcctgtgcccaggggat
tggcttcaggatatggagcgcctgtcagaggggctactgctacccttactgcacccaccc
actctgggcaccctgtgggattctcttgggtgctgctcccctctctgcaacccgcagttc
tgtgttccagcccctgaggctctccccagcctggtttcactgggctgcacaggaggacgc
ccctctctcagtctggccggctcagcctcacccttcccgttcctcactgccctcctgtct
ctcttcaacaccttggcccggatccacaaggggctatgtggccagctggctgccatattg
gctgccccaggactccagaactacttcctccagtgtgtggctcctatggctgccccacaa
ctcactcccttctctgcgtgggccttgcgccatgagtaccacctacagtacctggcactc
accctggcccagagagcggcaacagtccagccagttctggccgtcaatgccgctctccat
catagtatggtgttggccctgctgagccgacttctgcctggaagtgagtacctcgcccat
gagctactgctgagctgtgtgttccgtctggagttcctcccggaaagagcatcaggtggt
ccagaggcagctgacttctctgatctgctgtccttagggagcggcagggactctgcgagt
gggcgaggggctctgctggttcaggcctgtcaggacctccccagcatccgcagctgctac
ctgacccactgctcactggcccgagccaacctactagcatctcaggccttgtaccgaagg
gagctacggcaaatcccagccctgctgctccctgtgcctaaggagccactgctgcccacc
gactggcctttcctgccattgatccacctctaccaccaggcctcagacacgccctcagga
cttcctcctgctgacacagtaggcacagctatgcgggctctgcagtgggtgctcgtcttg
gaaagctggcgcccccaggccctctgggctgtgccgcctgctgcccgcctggcacggctc
atgtgtgtgttcctggtagacagtgagctgttccgggaaaccccaatacaacgtctggtg
gcagctctccttgcccggctctgccagcctaaagtcctgccagacctcaagctggattgt
ccgcttcctggcctgacatctttccctgacctctatgccaacttcctggagcattttgag
gctgtctcttttggggaccatctctttggagctctggttctccttcccctgcagcgtcgg
ttcagtgtcactttgcgcctcgccctctttggggagcatgtgggagccttgcgagctctg
ggcctgcctctgacccagttgcctgtgtccttggagtactatacagagcctcctgaagac
aacctggccctccttcagctgtacttccgtgtcctggttactggtgcactctgtgcacgc
tggtgccctgtactctatgctgtggctgtggctcatgtcaacagcttcatcttctcccag
gacccaaagagttcagacgaggtaaaggctgcccgcaggagcatgttgcagaagacttgg
atgctgacgaatgagggtctccggcagcaccttctccactataagctccctaatcctgcc
ctcccagaaggctttgagctgtatctccagctgccctctctgcgtcagcagtacctccag
agactggcctcagggatcctccaaaatggggaatcagagacctag
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