Prionailurus viverrinus (fishing cat): 125167567
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Entry
125167567 CDS
T09889
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125167567 (SOX30)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125167567 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125167567
NCBI-ProteinID:
XP_047717806
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Position
A1:191273222..191311117
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AA seq
768 aa
AA seq
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MERARPEPPLQLRQLPRATPPRPLRPAPPQLPVEGTSFRAAGADLPASPPTPCAAAITTV
ASSCGEAQASSVQPAARRLLQVKSEQVLLLPPGPPLPQALEEGVVASPSPARLLQLRPEL
LLLPPPPPASDGAPCRPELHPVQPRALHVKAEKQEPGPGLDPSAGTRRPVEAGHRASREA
KVEGAGPTLDCRRGGEKKGRLEAEEVMRDAAKGGEGKNLVAIREGIIKTEEPERLREDCR
LGTEPASNGLIHGSKEVILGQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIVSTNPTTIYPYRSPTYSVVIPSLQNTITQPVGDA
TPAIQLPTPAVQHPSPISLFQPTVSSTAQVAAQAPSLPLRPALPPQCFAGPSQTDTHRLH
SGANRSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQASPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESVDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEDEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgccgcttcagttgcgccaactgccgcgggcgaccccg
ccgcgcccgctccgtcctgctccgcctcagctgccggtggagggcacctcttttagggct
gcaggcgcggatctccctgcgtcgccgcccaccccgtgcgcggccgccattacgaccgtg
gcctcgtcgtgtggggaagcccaggcgtcgagtgtacagcccgcggcacggcgactgctg
caggtcaagtcggaacaggtgttgctgctgccaccagggccaccactgcctcaggccctg
gaagaaggcgtcgttgcttcaccctcgccagcgaggctgctgcagctgaggcccgagctg
ctgctgctgccaccgccgccgcccgcgtcggacggcgccccctgcagacccgagctgcac
ccggtgcagccccgggcgctgcacgtcaaggccgagaagcaggagccagggccgggcttg
gatccgtcggcggggactcgaaggcctgtggaggccggccatagggcctccagggaggcc
aaggtggaaggcgccgggccaaccctcgactgccgccgcgggggcgagaagaagggcaga
ttggaagcggaggaggtcatgagggatgcagcgaaaggcggggaaggtaaaaacctggtg
gccatcagagaaggcatcatcaaaacggaggaacccgagagactccgcgaggactgcagg
ctgggcactgagcccgcatccaatggcctgatccatggcagcaaggaggtcatcctgggc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctacac
acagtcccccctggggcccggatccagtttcagggacctccaccttcagagttgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatctttactggagccttct
gtaaaaattgaaactaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcactagccaaagctaacccagcagccaacaacgca
gaaatcagtgtccagcttgggttagaatggaacaaacttagcgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaaacacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctttaagtgtttccaatgtattttct
ggtaccacacagaatatcgtgtctacaaatcctacaacaatatatccctatcgctcacct
acctactctgtggtaattcccagcctacagaataccatcactcaaccagttggtgatgcc
acacctgccatccagctgcccacacctgcagtccagcacccaagccccatctcacttttc
cagcccactgtctccagtactgctcaggtggctgcccaggctccaagtctgcccctccga
ccggcactcccaccccagtgcttcgccgggccctcccagacagacactcatcggctacat
tctggagccaatcgctctgtgaagagacccactcctgtctctctggagaacaccaacagg
attccaacaagtgcaagtactgcccatgccagatttgcaacctcaaccatccagcctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtttaccaggcttctccccttggccatccagccacattgtttggg
acaccaccgcgattctcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgtacacacagcgaagattct
cggagttgtgagagcgtggatgggacctcttactataacagtcatagccacagtggggaa
gaatacttaaatcctatgcctcagctggacattggagccttggagaacgtcttcacagcc
ccaacgtcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggat
gaagaaaaagtgctcaggaatttataa
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