Prionailurus viverrinus (fishing cat): 125167827
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Entry
125167827 CDS
T09889
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
125167827 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125167827 (DICER1)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125167827 (DICER1)
microRNA pathway
RISC loading complex
125167827 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125167827
NCBI-ProteinID:
XP_047718539
LinkDB
All DBs
Position
B3:complement(133516553..133590076)
Genome browser
AA seq
1924 aa
AA seq
DB search
MNESPALQPLSMAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHN
TIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAPQVSAVRTHSDL
KVGEYSSLEVNAAWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHL
AILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATD
LVVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLLELEEALNFINDCNISVRSKERDSTSIS
KQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALC
EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDD
EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI
TGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL
PTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDAGET
DVEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELP
DGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKET
VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTT
PLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLS
LQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMED
IEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSK
FPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEK
RKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAG
VGVRSLPVDFRYPNLDFGWKKSIDSKSFISIASSSWAENDNYCKHSTIVVPENAARQGAT
RTSSLENHDQMSVNCRTLFGESPGKLQIEASTDLTATNGLSYNKNLANGSCDLANRDFCQ
GNQLSYCKQEIPVQPTTSYPIQNLYSYENQPKPSDECTLLSNKYLDGNANTSTSDGSPAA
ATTPGTNEAVPAPRDGRASAQSPCPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEML
GDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPV
NWLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDQDFEEDDEEGEDLTWKVPKEDADD
EDDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPLSATDSAYEWKMPKKSALGSMPFSSDF
EDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKS
IADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPARENFNGQQKALS
GSRAAASVAGPRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFK
NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA
LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK
EEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELL
EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQ
VPNS
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagccctgctttgcagcccctcagcatggcgggcctgcagctcgtgaccccc
gcctcctcaccaatgggccctttctttggactgccatggcaacaagaagcaatccatgat
aacatttatacgccaagaaaataccaggtggaactgctcgaagcggctctggatcataac
accatagtctgtttaaacactggctcagggaagacgtttattgccgtactgctcactaaa
gagctgtcctatcagatcaggggagacttcaacagaaatggaaaaaggacggtgttcttg
gtcaactctgcaaaccaggttgctccacaagtgtcagctgtcagaactcattcagatctc
aaggttggggaatactcaagcctggaagtaaatgcagcttggacaaaagagaagtggaac
caagagtttactaagcaccaggttcttgttatgacctgctatgtcgccttgaatgttttg
aaaaatggttacttatcgctgtcggacattaaccttttggtgtttgatgagtgtcatctt
gcgatcctagaccacccctaccgagaaattatgaagctctgtgaaaactgtccatcgtgt
cctcgtatcttgggactgactgcttccattttaaatgggaaatgcgatcccgaggaattg
gaagaaaagattcagaagctggagaaaatcctcaagagtaatgctgagaccgcaactgac
ctggtggtcttggacagatacacttctcaaccgtgtgagattgtggtggactgtgggccg
ttcacggaccgaagtggcctctatggcaggctgctgctggagctggaggaggcactgaac
tttatcaacgactgtaacatatctgtgcgttcgaaagagagagattcgacttcaatttct
aagcagatactgtcagactgtcgtgccgtattggtggtcctgggcccctggtgtgcagat
aaggtcgctgggatgatggtccgggagctgcagaagtacatcaaacacgagcaagaggag
ctgcacaggaaatttctattgtttacagacaccttcctaaggaaaatccatgcactatgt
gaagagcacttctctcctgcctcacttgacctgaaatttgtaactcctaaagtaataaaa
ctgctcgaaatcttgcgcaagtacaaaccgtatgagcggcagcagttcgagagcgtcgag
tggtataataacaggaatcaggataattacgtgtcctggagtgattctgaggatgatgac
gaggacgaagagatcgaagaaaaagagaagccggagaccaatttcccgtctccgttcacc
aacatcttatgcgggatcatttttgtggaaagaagatacacagcagttgtcttaaacaga
ttgataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttata
actggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcagaattcaga
aaacaggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcgaca
agcattgtggaagagggtgttgacataccaaaatgcaacttggtggttcgttttgattta
cccacagagtatcgatcctatgttcaatctaagggacgagcaagggcaccgatctctaat
tacataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatac
aaagctattgaaaagatcttgagaaacaagtgttccaagtccgttgatgcgggtgagact
gacgttgaacctgtcgtggatgatgacgatgtgttcccgccatatgtgttgaggcccgat
gacggtggtccgcgagtcacgatcaacacggccattggacacatcaacagatactgtgct
agattaccaagtgatccgtttactcatctagctcctaaatgtagaactcgagagttgcct
gatggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccatt
gttggtccgccaatgagctgtatacgattggccgaaagagttgtagctctcatttgctgt
gaaaaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagacg
gttaaatatgaagaagagctcgatttacatgacgaagaagagaccagcgttccaggaaga
ccaggttccacaaagcgaagacagtgctacccaaaggcaattccggaatgtttgagggat
agctatcccaaacccgatcagccctgttacctgtatgtgatagggatggttctgacgaca
cccttacctgatgaactcaacttcagaaggcggaagctctatccccctgaggataccacg
agatgctttggaatactgacggccaaacccatacctcagatcccgcactttcctgtgtac
acgcgctccggagaggtcaccatatccattgagttgaagaagtctggtttcacgttgtct
ctccaaatgcttgagttgatcacacgacttcaccagtatatattctctcatattcttcgg
cttgaaaaacctgcactagaatttaaacccacagacgctgattcagcatactgtgttcta
cctcttaacgttgtgaatgactccagcactttggacattgactttaaattcatggaagat
attgagaaatctgaagctcgcataggcattcccagcacaaagtattcaaaagaaacaccc
tttgtttttaaattagaagattaccaggacgcagtcatcattccgagataccgtaatttt
gatcagcctcatcgattttatgtagctgatgtatacactgatcttaccccactgagtaaa
tttccttcccctgagtatgaaacctttgcagaatattataaaacaaagtataaccttgat
ctgaccaatctcaaccagccactgctggatgtggaccacacatcttcgagacttaatctt
ttgacaccgcgccatttgaatcagaaggggaaagcccttcctctaagcagtgctgagaag
agaaaagccaagtgggaaagtctgcagaataaacagatcctggttccagagctctgtgct
atacatccgattccagcatcactgtggagaaaagcagtctgtctccctagcatactctac
cgccttcactgccttctgaccgcagaggagctaagagcccaaacggccagcgacgctggc
gtgggagtccgatcacttcccgtggattttagataccccaacctagacttcgggtggaag
aaatctatcgacagcaagtccttcatctcaattgctagctcctcttgggctgaaaacgat
aattactgtaagcacagcacaattgtagtccctgaaaatgctgcacgtcaaggtgctact
agaacctcctctctagaaaatcacgaccaaatgtctgtgaactgcagaacgctcttcggt
gagtcacccggtaagctccagatcgaagcttcgacagatctcacggcgaccaacggtctt
tcgtacaataaaaaccttgccaatggcagttgcgatttagcgaacagagacttttgccaa
ggaaatcagctgagttactgcaagcaggaaatacctgtacaaccaactacctcatatccc
attcagaatttatacagttacgagaaccagcccaagcccagcgatgaatgtactctcctg
agtaacaaataccttgatggaaatgctaacacatctacctcagatggaagtcccgcagcg
gccacgacgcccggtactaacgaagctgttcccgcgccccgggacgggagggcttctgcg
cagagcccttgtcccggctactcctcgaggactcttggcccgaaccctggactcattctg
caggctttgaccctttcaaatgctagcgatgggtttaacctggagcggcttgaaatgctt
ggtgactcctttctaaagcatgccatcaccacgtacctgttttgcacttaccccgacgcg
cacgagggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctgtatcgg
cttggaaaaaagaagggactgcccagccgcatggtggtgtccatatttgatccccctgtg
aattggcttcctcctggttatgtagtaaaccaagacaaaagtaatacagataaatgggaa
aaagatgaaatgacaaaagactgcatgttggctaatggcaaactggaccaggactttgag
gaggacgacgaggagggggaggatctgacgtggaaggttccaaaggaggacgccgacgac
gaagatgatttcctggagtatgatcaggaacatatcaaattcatagataacatgctaatg
ggatcaggagctttcgtaaagaaaatttctctttctcctctctcagccactgattctgca
tacgaatggaaaatgcccaaaaaatccgccttgggtagcatgccattctcctcagatttc
gaggacttcgactatagctcttgggatgccatgtgctacctggatcccagcaaagccgtc
gaagaggatgactttgtggtggggttctggaatccgtcggaagagaactgtggtgtcgac
acagggaaacagtccatctcttacgacctgcacaccgagcagtgcatcgcggacaaaagc
atagccgactgtgtggaggccctgctgggctgctatttgaccagctgcggggagagggct
gcccagctgttcctctgctccttggggctcaaggtgctcccggtaattaaaaggaccgat
cgggaaaaggccatgtgccccgccagggagaatttcaacggccaacaaaaggccctttca
gggagccgggccgccgcctcggtggccggcccgcgctcctccgtcctgaaagacttggag
tacggttgtttgaagattccaccacgatgcatgtttgatcatccggacgcagataaaaca
ctgaatcacctgatatcgggttttgagaattttgagaagaaaatcaactacaggttcaag
aacaaggcttaccttctgcaagcttttacacacgcctcctaccactacaatactatcact
gattgttaccagcgcctggagttcctgggagatgcgattttggactacctcataaccaag
cacctttacgaagacccgcggcagcactccccgggcgtcctgaccgacctgcggtccgcg
ctggtcaacaacaccatcttcgcgtcgctggcggtcaagtacgactaccacaagtacttc
aaagccgtctcccccgagctcttccacgtcatcgacgacttcgtgcagttccagctggag
aagaacgagatgcagggcatggactcggagctcaggaggtctgaggaggacgaagagaaa
gaagaggatattgaagttccaaaggccatgggggacattttcgagtcacttgctggtgcc
atttacatggatagtgggatgtccctggagatggtctggcaggtgtactatcctatgatg
cggccgctgatagaaaaattttcggcaaatgtgccccgctcccctgtgcgagaattgctt
gaaatggaaccagaaactgccaaatttagcccggctgagagaacgtacgacggcaaggtc
agagtcacggtggaagtggtggggaaggggaaatttaaaggcgtcggccgaagctacagg
attgccaagtccgcggcagcaagaagagccctccgcagcctcaaagccaatcaacctcag
gttcccaacagctga
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integrated database retrieval system
