Prionailurus viverrinus (fishing cat): 125168631
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Entry
125168631 CDS
T09889
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125168631 (PRPF39)
Spliceosome [BR:
pviv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125168631 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
125168631
NCBI-ProteinID:
XP_047719766
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All DBs
Position
B3:89094700..89133527
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AA seq
667 aa
AA seq
DB search
MQNSHMEEYRNSTNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNTSTEENEI
TNVVDLPVTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDAGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggaagagtacagaaattctactaatggcagcacaggcaacagt
tcagaggtagtggtagaacagtctgctgatttcagtactgagattatgaatgttacggaa
atggaacagtcccctgatggatctcctaatgtgaatacatctacagaagaaaatgaaata
acaaatgttgtggaccttccagtgacagaaacggaagcaaatttccctcctgaatatgaa
aaattctggaaaactgtagaaaacaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacaatcagatgaggtgtatcggcgggggcttcaggcaatacctcttagt
gttgacctatggatacattatataaacttcttaaaagaaacattggacgctggtgatcct
gagacaaacagcacaataagaggaactttcgagcatgctgttttagctgcaggaacagat
ttccgatctgacagactatgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgcattcttggtattccaacacagctgtacagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatctgttaactggt
gaacagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggtgatgat
ggtcctcctggtgatgatctaccatcgggaattgaagacataacagatccagcaaagcta
attacagaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggagaaggcacaactaaaaaactggaaagaatacttagaattt
gaaatagaaaacgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgattgagaagagta
agtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgctaaatcaaataatgagtcatcgttttatgctatcaaactagcccgacatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacaaagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggagtttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatgggtcagaagaaccagaggaaaagaaagctcacaca
gaagacacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagcg
gcatataattatagtgcctggtatcaatacaattatcagaatccgtggaattatggacag
tattaccctccccctccaacctga
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