Prionailurus viverrinus (fishing cat): 125168863
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Entry
125168863 CDS
T09889
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04140
Autophagy - animal
pviv04148
Efferocytosis
pviv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125168863 (VPS18)
04148 Efferocytosis
125168863 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125168863 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125168863 (VPS18)
Membrane trafficking [BR:
pviv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125168863 (VPS18)
Hops complex
125168863 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125168863
NCBI-ProteinID:
XP_047720240
LinkDB
All DBs
Position
B3:complement(57660145..57668324)
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDARVHKMFLDHTGCHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGTE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAVVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADYCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNFYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNELGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcggggtatgtgaatgcccagctagagaaggaa
gtgcccatcttcacaaagcagcgcattgactttaccccttctgagcgtatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggccaatgaacccaaccatgtggagctgggacgcaaggatgatgccagagtt
cacaagatgtttctggaccacactggctgtcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtacggccactggcacgctggaaaggacag
ctggtggagagtgtgggctggaacaaggcactgggcaccgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatcttcgaagcagagctctcagccagcgagggtgga
cttttcggccctgccccagatctttacttccgtccattgtacgtactaaatgaagaaggg
ggtccagcgcctgtatgctcccttgaggctgagcggggtcctgatgggcgcggctttgtt
atcgccacaactcggcagcgcctcttccagttcataggtcgagcagcagaggggactgag
gcccagggcttctcagggctcttcgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggcgttctatacccccaagttgcgctctgca
cctcgggccttcgcctggatgatgggggatggcgtgttgtatggagcattggactgtggg
cgccccgattccctgctgagtgaggagcgagtctgggagtacccagagggggtaggtcct
ggggccagcccacctctggctgtcgtcttgacccagttccacttcctgctgctgttggcg
gaccgggtggaggcagtgtgcacgctgacagggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacgggccacctgtgggcc
tacactgagcgggccgtcttccgctaccatgtgcagcgggaggcccgggatgtgtggcgc
acctacctggacatgaaccgctttgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaagctgattactgctttcgccagcgtcgttacctg
gagagtgcccgctgctatgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggccgagttcctgcagcgaaaattggccagtttg
aagccagccgagcgtacccaggccacactgctcaccacctggctgacggagctttacttg
agccggctcggggctctgcagggtgatcctgaggccctgaacttctaccgggaaacacgg
gagcgcttccgggccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccatgaactgcttgccagccatggagacacagaacacatggtgtactttgcc
gtgatcatgcaggactatgagcgagtggtggcataccactgccagcacgaggcctacgag
gaagccctggccgtgcttgctcgccaccgtgaccctcagcttttctataagttctcaccg
atcctcattcgccacatcccccgccagctggtggatgcttggattgagctgggcagccgg
ctagatgcccggcagctcattcctgccctggtgaattatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgagctgggcgagactgag
caggccattcataactacctgctgtcgctgtatgcccgaggccagcccgcctcactgctg
gcctacctcgagcaggccggggccagcccgcaccgtgtgcattatgacctcaagtatgcg
ctgcggctctgtgctgagcacggccaccaccgtgcttgtgtccatgtctacaaggtccta
gaactgtatgaggaggctgtggacctggccctgcaggtggatgtggacctagccaaacag
tgtgctgacttgcctgaggaagacgaggaactgcgcaagaaactgtggctgaagattgca
cgacacgtagtgcaggaggaggaagatgtgcagacggccatggcctgcctggccagctgt
cccttgctcaagattgaggacgtgctgcccttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcactcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagatctacaggagctg
cggggccgctatggcacagtggagccccaggacaaatgcgctacctgcgacttccccctg
ctcaaccgccctttttaccttttcctctgtggccacatgttccacgctgactgcttgctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctgcagcga
aagttgggggctgctccggcccctaccaagggctctgcccgcgcaaaggaggccgagggt
ggggctgccgctgggggacccagtcgggaacagctcaaggctgacctagatgaactggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctatgaggaggagcacctcagttggctgtag
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