Prionailurus viverrinus (fishing cat): 125169915
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Entry
125169915 CDS
T09889
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03082
ATP-dependent chromatin remodeling
pviv04714
Thermogenesis
pviv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125169915 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125169915 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125169915 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125169915 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125169915 (SMARCC2)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125169915 (SMARCC2)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125169915 (SMARCC2)
PBAF complex
125169915 (SMARCC2)
GBAF(ncBAF) complex
125169915 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
125169915
NCBI-ProteinID:
XP_047721752
LinkDB
All DBs
Position
B4:complement(79804516..79824686)
Genome browser
AA seq
1245 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKSNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEVPKKDEEKGKQGDSEKE
SEKSDGDPIVDPDKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPAGTAGPPAVHSLAMA
PASVAPAPAGSGAPPGSMGPSEQIGPTGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcgggcccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccttgtctagcctggttgtacagctgctacagtttcag
gaagaagtttttggcaaacatgtcagcaatgcaccactcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaaatccttggtgcagaataactgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagagcaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacttggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggattctggacacagacactttcaatgaatggatgaatgaggaagactacgaggtgaat
gatgacaaaagccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag
gtgaacagcccagattcagaccgacgggacaagaaaggggggaactataagaagaggaag
cgctctccctctccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggtccc
tcaacaccttacaccaagtcaaagcgtggccacagagaggaggagcaagaagacctaaca
aaggacatggatgagccttcaccagtccccaatgtagaggaggtgacattgcctaaaaca
gtaaacactaagaaggattccgagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgaaaacagtacg
gggaacaagggagagcagacgaagaacccggacctgcatgaggacaatgtgactgaacag
acccaccacatcattattcccagctatgctgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccctgagttctttaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaatttcatgattgacacttaccggctgaacccccaagagtat
cttacctccactgcctgccgcaggaacctggcgggtgacgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccgatggggcctccgcccacctctcacttccatgtcttagcagacacgccgtcaggg
ctggtgcctctgcagcccaagacaccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaacttcgggctgcgcacagacatgtacacaaagaagaacgtcccctcc
aagagtaaagctgcagccagtgccactcgagagtggacggaacaggagaccctgctactc
ttagaggcactggaaatgtacaaagatgactggaacaaagtgtcagaacacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaagagttctccaaaatgaaggaagaagtacccaca
gccttggtggaggcccacgttcggaaagtggaggaagccgccaaagtgacaggcaaggcg
gacccagccttcggtctggaaagcagtggtatcgccggaaccacctctgatgagcctgag
cggatcgaggagagcgggactgatgaggcacgggcagagggccaggccacagaggagaag
aaggagcccaaggagccccgagaaggagttggggctgtcgaggaagaagcgaaagagaaa
accagcgaggttcccaagaaggatgaagagaaagggaaacaaggtgacagcgagaaggag
tcagagaagagcgatggggacccaatagtcgaccccgacaaggagaaggaaccaaaggag
gggcaggaggaggtgctgaaggaagtggtggagtcagagggggagaggaagacgaaagtg
gagcgggacattggcgagggcaatctctccaccgccgctgctgctgccctggctgccgcc
gctgtgaaggccaagcacctggccgccgtggaggagaggaagatcaaatcgctggttgcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaagagttg
gagacgatcatggaccgggagcgagaggcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtacgcagagatgagggcccggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatcccacctgcgggcactgctgggccacccgcagttcacagcttggccatggct
ccggcctctgtggcccctgctcctgctggcagcggggcccctcctggaagcatgggcccc
tctgaacagattgggcccacagggtcaacggcagggccgcagcagcagcagccagctgga
gccccccagcctggggcggttccgccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctcccgctccatccatcatcccatttggtagtctagctgactccatcagtattaac
ctgccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcact
cttcccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggtacccccctgcctccagaccccacggccccaagcccaggcacagtcacccct
gtgccacctccacagtga
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integrated database retrieval system
