Prionailurus viverrinus (fishing cat): 125170475
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Entry
125170475 CDS
T09889
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125170475 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pviv01009
]
125170475 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125170475 (PCDH9)
Protein phosphatases and associated proteins [BR:
pviv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125170475 (PCDH9)
Cell adhesion molecules [BR:
pviv04515
]
Cadherins
Protocadherins
125170475 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
RCR
Motif
Other DBs
NCBI-GeneID:
125170475
NCBI-ProteinID:
XP_047723119
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All DBs
Position
A1:complement(41854437..42783126)
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AA seq
1195 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDTVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYEPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGL
AEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRA
WKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQAGGTIESPKEHQL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaacgagtgtttctttgaacttgaggtagtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatcccctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcctgtgggcacctctgtaattcagctccatgccactgatgcagat
ataggcagcaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
aggctctttgctttaaataatactactgggctgattacagttcagaggtccctagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcctgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatacgataaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaaacccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcggacattgtttatcagcttggaccgaatgcctccttctttgatttggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaggagcggttcattttt
acagtaactgccagggacaatggaacccctcccctccaaagccaagcggccgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctctccattctaaatgacaatgataattttgtgctg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctccactgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccttcc
aacacttcttttaagttggtacccctctcagccattcctggctctgtggtagcagaagtt
tttgcagtggatatcgacactgggatgaacgccgaactgaagtatacaattgtgagtggg
aacaacaaaggcttgtttcggatcgatccagtaacaggtaacatcactctggaagagaag
ccagcgcctactgatgtgggcttgcaccgtttggtggtcaatataagtgacctgggatac
cctaagtctttgcacacactcgtgcttgtttttctttacgttaatgacaccgctgggaat
gcctcctatatctatgacttgattcgcaggactatggagaccccactggataggaacata
ggggacagtagccaaccctatcaaaatgaggactatctcaccatcatgattgccatcgtc
gcaggggccatggtggtcatagtggtgatcttcgtcaccgtcctggtgcgatgtcgccat
gcatcgaggttcaaagcagctcagaggagcaagcaaggtgctgagtggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaattgaagagtccaaacctgacgatacagttcacgaacctatc
aatgggacaataagcctgcccgctgagctggaggagcaaagtataggaagatttgactgg
ggcccagcccctccaacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatcttaaaccagacactccggtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctc
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaagccattacgagccacaggacgagttctacgaccaggcctctccggacaagagg
accgaagcagatggcaactccgaccccaactctgatgggcctttgggtccccgaggatta
gctgaagccacagagatgtgcactcaagagtgcttggttttgggtcactctgataattgc
tggatgcctcctggcttgggcccatatcaacaccctaaatctcctctctcaacctttgca
ccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacacccttaccagagcc
tggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggctccaatgaa
ggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaagtcttat
aagcaagcaggaggtactattgagagtccgaaggagcaccaactctaa
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