Prionailurus viverrinus (fishing cat): 125170867 Help Entry 125170867         CDS       T09889                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism pviv  Prionailurus viverrinus (fishing cat) Pathway pviv04151   PI3K-Akt signaling pathway pviv04510   Focal adhesion pviv04512   ECM-receptor interaction pviv04518   Integrin signaling pviv04974   Protein digestion and absorption pviv05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:pviv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     125170867 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125170867 (COL2A1)    04518 Integrin signaling     125170867 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125170867 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     125170867 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     125170867 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pviv00536]     125170867 (COL2A1) Glycosaminoglycan binding proteins [BR:pviv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125170867 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  125170867 NCBI-ProteinID:  XP_047723711 LinkDB All DBs Position B4:complement(71923128..71953699) Genome browser AA seq 1487 aa AA seqDB search MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggtgacaaa ggtgaaaaaggtgcccctggaccgcgtggcagagacggagagcctgggacccctggaaat cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaacttcgct gcccagatggccggaggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt ccccgcggtcctcctggcccccccggaaagcctggcgatgatggtgaagccggaaagcct ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttctccg ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccccgctggggct gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt cctgctggcggtcctggcttccctggtgctcccggtgccaagggtgaggctggccccact ggtgctcgaggtcccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaagga tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga gcccctggtcctgctggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc cccaagggtgccaacggcgatcctggccgtcccggagagcctggccttcctggagcccgg ggtctcactggacgccccggtgatgccggtcctcaaggcaaagttggtccttctggagcc cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggc gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag ggacttcctggtgcccctggactgagaggtcttcctggcaaagatggtgagaccggtgct gcggggccccccggacccgctggacctgccggtgaacgaggcgagcagggtgcccctggg ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca ggtgaccagggtgttcctggtgaagctggagcccccggccttgtgggtcccaggggtgaa cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct ggggctcagggccctccaggtctgcaggggatgccgggtgagaggggagcagctggcatc gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat ggtgagaagggagaagttggacctcctggtcctgcgggaactgctggtgctcgtggtgcc ccgggtgaacgtggagagaccggtccccccgggcccgctggattcgcaggacctcccggt gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct ggtgccccgggtcctcagggcccctctggagctcctggacctcagggtcctactggtgtg actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagtggcccccctggccgt gctggcgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg ggcattgttggtcttcctgggcaacgtggtgagagaggattccctggcctgcctggccca tcgggtgagcctggcaagcagggagctcccggagcatctggagaccgaggtcccccgggc cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag actggtcccgtgggtgctcctggagcccctgggccccctggctctcctggccccgctggc ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca ggaccagccggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa gctggagaggctggcgagaggggcctgaagggacaccgtggcttcactggtctgcagggt ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc cctggccccattggacctcctggtccccgcggacgttcgggcgaaactggcccggctggt cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc gagacctgtgtctaccccaacccagcgagtgttcccaagaagaactggtggagcagcaag agcaaggacaagaagcacatctggttcggagaaaccatcaacggtggcttccacttcagc tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg gatgaagcggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtagag atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcacgtctc cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac atagggcctgtctgcttcttgtaa

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