Prionailurus viverrinus (fishing cat): 125171113
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Entry
125171113 CDS
T09889
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125171113
Cell adhesion molecules [BR:
pviv04515
]
Cadherins
Protocadherins
125171113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125171113
NCBI-ProteinID:
XP_047724198
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Position
A1:117684395..117687653
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AA seq
790 aa
AA seq
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MMDVVIGTGKGFFPLESDLIEMAQTKVHRKKRQVTILIIWMILWEVGSESIQYSVLEETG
SGTFVANLTKDLGLKRGELAERGAQVVFKGNRQHLQLDPQTYDLLLNEKLDREELCGSTE
PCVLPFQVLLENPLQFFQAALRVRDINDHAPEFPTREMLLKISEITKPGKLFPLKMAQDL
DAGSNGLQSYIISSNPHFHVLTRNRSDGRKFPELVLDKALDREEQPELRLTLTALDGGSP
PRSGTTEIQILVLDINDNAPEFAQEQYEAQIPENNSLGSLIITVSARDLDAGSFGEVSYA
LFQVDDINQPFEINAITGEIRLRKTLDFEEFQSYHVDIEATDGGGLSGKCSLVIKVLDVN
DNTPELTMSSLTSPIAENLPDIIVAVFSVSDADSGQNQQIVCSIDDNLPFLLRPSVENFY
TLVTEGALDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVR
ENNSPALHIGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDY
EALQAFEFGVRATDRGSPALSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAE
AGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLV
VLVKDNGEPPRSASVTLHVLLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLF
LFSVLVFVAVRLCRRSRAASAGRCSGPEGHFPGHLVDVSGAGTLSQSYQYEGIGKEMEES
PTVRDSFLFS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtggtgattgggactggaaaaggattttttcctctggaatcagacctaata
gaaatggcgcaaacaaaagtacatcgcaagaaaaggcaagtgactatcctcattatatgg
atgattttgtgggaagtgggttcagaatcgattcaatattctgtactggaggagacagga
agtggcacgtttgtggccaatttgacaaaggatctgggactcaagagaggagagctggct
gagcggggtgctcaggtcgttttcaaggggaacagacagcatttgcagcttgacccacag
acttatgatttgctgctaaatgagaaactggaccgggaagagctgtgcggttccactgag
ccctgtgtgctacctttccaagtattactggaaaatcccttgcagttttttcaggctgct
ttacgagtcagagatataaatgaccacgccccagagttcccaaccagagaaatgctacta
aaaatatcagaaattactaaaccaggaaagctatttcctttgaaaatggcacaggattta
gacgctggtagcaacggtcttcagagctacataatcagctccaatcctcatttccacgtt
ctcactcgcaatcgcagcgacggcaggaagttcccggagctggtgctagacaaagccttg
gaccgggaggagcagcccgagcttaggcttaccctcacagcactggatggtgggtctccg
ccgcgttctggaaccacggagattcagatactggtcttggacatcaatgacaacgccccc
gagtttgctcaggagcaatatgaggcgcaaatccctgaaaacaattccctgggctctctg
attatcaccgtctcagcgagggatttagatgctggatcttttggggaagtatcttacgcc
ctatttcaggtagatgacattaatcagcccttcgaaataaacgcaattacaggcgaaatt
cgactgagaaagactttggattttgaggaatttcaatcttaccatgtggatattgaggct
acagatggcgggggactatcaggaaaatgctctttggtcatcaaggttctggacgtaaat
gacaacactcctgaattgaccatgtcctcactcaccagtcccattgccgaaaacctgcca
gacatcatagtggcagttttcagtgtatcagatgcagattctggacaaaatcaacagatt
gtttgctctatagatgacaatctcccctttcttctaagaccatcagtggagaatttctac
acattggtgactgaaggagcgctggatagagagagccaggccgagtacaacatcaccatc
accgtcaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacggtc
tccgacgtcaacgacaacgcccccgccttcagccaaaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcgggc
gccaacgcgcaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctggcc
tccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattac
gaggcgctgcaggcgttcgagttcggcgtgcgcgcgaccgaccgcggctcgcccgcgctc
agcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtg
ctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgccgtcaagcacaggctggtg
gtgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgaggcg
cgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcgtct
gcgggtcgctgctcggggcctgagggccactttccgggccacctggtggacgtcagcggc
gcggggacgctgtcccagagctaccagtacgagggcattggaaaggaaatggaggaaagc
cccacggttcgggatagtttcttattcagttaa
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