Prionailurus viverrinus (fishing cat): 125171147
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Entry
125171147 CDS
T09889
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125171147 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125171147 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pviv00537
]
125171147 (CNTN1)
Cell adhesion molecules [BR:
pviv04515
]
Immunoglobulin superfamily
Contactins
125171147 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pviv00537
]
Others
125171147 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
Interfer-bind
Ig_J_second
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
125171147
NCBI-ProteinID:
XP_047724258
LinkDB
All DBs
Position
B4:65376207..65742700
Genome browser
AA seq
1018 aa
AA seq
DB search
MKMWLLVSHLVIISFTTCLSEFTWYRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGK
VSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
IYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIW
SFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE
GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSN
RELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAF
QVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWDHVVEKIVESY
QIRYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFT
KKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSPSLLGLLLPALGILVYLDF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgctggtcagtcaccttgtgataatatcttttacaacctgcttatca
gagtttacatggtacagaagatatggtcatggagtttctgaggaagacaaaggatttgga
ccaattttcgaagagcagccaatcaataccatttatccagaggaatcaccagaaggaaaa
gtttcactaaactgtagggcacgagccagccctttcccagtttacaaatggagaatgaat
aatggggatattgacctgacaagtgatcggtacagtatggtaggaggaaacctggttatc
aacaaccctgacaaacagaaagatgctggaatatattactgtttggcatcaaataactat
gggatggtcagaagcactgaagcaaccctgagctttggatatcttgaccctttcccacct
gaggagcgtcctgaggtcagagtgaaagaagggaagggaatggtgcttctctgtgatcct
ccctaccattttccagatgaccttagctaccgctggcttctaaatgaatttcctgtattt
atcacaatggataaacgaagatttgtgtctcagacaaatggaaatctctacattgcaaat
gtcgaggcatcagataaaggcaattattcctgctttgtatccagtccttctattacaaag
agtgtgttcagcaaatttatcccactcattccactacctgaacgaacaacaaaaccatat
cctgctgatatcgtagttcagttcaaggacatttatgcattgatgggccaaaatgtgaca
ttagagtgttttgcacttggcaatcccgttcctgatatccgatggcggaaggtcctagaa
ccaatgccaagtactgctgagatcagcacctctggggctgtcctcaagatcttcaatatt
cagctagaagatgaaggcacatatgaatgtgaggctgagaacaatagaggaaaggataaa
caccaggcaagaatttatgttcaagcgtttcctgagtgggtagaacatatcaatgacaca
gaggtggatataggcagtgacctctattggccttgtgtggccacagggaagcccatccct
acaatccgatggctgaaaaatggatacgcgtatcataaaggggagttgagactgtatgat
gtgacttttgaaaatgctggcatgtaccagtgcatagctgaaaacacacatggagccata
tatgcaaatgcggagttgaagatcttggctttggctccaacttttgaaatgaatcctatg
aagaaaaagatcttagctgctaagggaggaagggtcataattgaatgcaaacctaaagca
gcacccaagccaaaattctcatggagtaaagggacagagtggctcgtcaatagcagcaga
atactcatttgggaagacggcagcttggaaataaataacattacaagaaatgatggaggt
atctatacatgctttgcagaaaataatagagggagggctaataacactggcactcttgtt
attacagatcccacgagaattatattggccccaattaatgctgatattactgttggagaa
aatgctaccatgcagtgtgctgcgtcctttgatcccgccctggatctcacatttatttgg
tccttcaatggctatgtgatcgattttaacaaagagaacattcattaccagcggaatttt
atgctggattccaatggagaactgctcatccgaaatgcccagctgaagcatgctgggaga
tacacgtgcactgctcagacaatcgtggacaattcttcagcttcagctgatcttgttgtg
cgaggccctccaggccctccaggtggtctgcgaatagaagacattagagccacttctgtg
gcacttacttggagccgtggttcagacaatcatagtcctatatctaaatacactattcag
accaagactattctttcagatgactggaaagatgcaaagacagatcccccaatcattgaa
gggaatatggaggcagcaagagcagtggatttaataccatggatggagtatgaatttcgt
gtggtagcaaccaatacgttgggtataggagagcccagtataccatcaaacagaattaaa
acagatggtgctgctcctaatgtggcgccttcagatgtaggaggtggaggtggaagcaac
agagagctgaccataacatgggtgcctttgtcaagagaataccactacggcaacaatttt
ggttacatagtggcatttaagccttttgatggggaagaatggaaaaaagttacagtaact
aatccagatactggccgctatgtccataaagatgagaccatgcgcccttccactgcattt
caagtcaaagttaaggccttcaacaacaaaggagatggaccttacagcctcacagcagtc
attaattcagcacaagacgctcccagtgaagccccaacagaagtaggtgtaaaagtctta
tcatcttctgagatatctgttcattgggatcatgttgtagaaaaaatcgtggaaagctat
cagattcggtattgggctgcccatgacaaagaagcagctgcacacagagttcaagtcacc
agccaagagtactcggccaggctggagaaccttctgcccgacacccagtactttgtggaa
gtcagggcctgcaatagcgcagggtgtgggcctcccagtgacatgattgagaccttcacc
aagaaagcacctccgagccagcccccaaggatcatcagttccataagatctggttcacgc
tatataatcacctgggatcatgtggtagcactatcaaatgaatctacagtgacaggatat
aaggttctctatagacccgatggccagcatgatggcaagctgtattcaactcataaacac
tccatagaagttccaatccccagggatggagagtatgttgtagaggttcgtgcacacagt
gatggaggagatggagtagtgtctcaagtcaaaatttcaggtgtatccaccctatcacca
agccttcttggcttactgctgcctgcccttggcatccttgtctacctggatttctga
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