Prionailurus viverrinus (fishing cat): 125171290
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Entry
125171290 CDS
T09889
Name
(RefSeq) protocadherin beta-13-like isoform X1
KO
K16494
protocadherin beta
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125171290
Cell adhesion molecules [BR:
pviv04515
]
Cadherins
Protocadherins
125171290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125171290
NCBI-ProteinID:
XP_047724567
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Position
A1:117706537..117717679
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AA seq
787 aa
AA seq
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MEASGKFICRQRQVVLFFVLLGLSQAGMEPRRYSVVEETEGSSFVTNLAKDLGLGQTELS
KRGARVISKGNKLHLKLDQETGDLLLNEKLDREELCGHTDPCVLRFQVLLENPLQFFQAE
LQVIDINDHSPVFVDRDMLLKISESSPPGTTFPLKNAQDVDVGRNNIETYIISPNSYFRV
LTRKSSDGSRYPELVLDKALDREQEPELRLTLTAQDGGSPPRSGIAQINIEVVDINDNAP
EFEQSLYRVKIPEDSPIGFLIVTVSATDADIGVNGEISYSLFQASEEICKTFEINSMTGE
IRLKKQLDFERIQFYEVNIEARDSGSFSGKCTVLTQVLDVNDNAPEITMSAFTRHIPENS
PEAMVAVFSVSDLDSEENGKINCTIQDDLPFLLKSSLENFYTLVTERPLDRESQAEYNIT
ITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRIRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPA
LSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVKDNGEPPRSASVTLHV
LLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAA
SAGRFSGPEGHFPGHLVDVSGAGTLSQSYQYETKILLWTSRSKVLIEALTYYLGETPQLI
FTGSNTA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagtgggaagttcatttgcagacaaaggcaagtcgttttattctttgtcctc
ttgggcttatctcaggcgggtatggaacctaggcgctattctgtggtggaagaaaccgag
gggagctcctttgtaaccaatttagcaaaggatctaggtctgggtcagacggaactctcc
aagcgtggggcaagggttatttccaaagggaacaaactacatttgaagctggatcaggag
acaggagatttgttgctaaatgagaaactggaccgggaggaattgtgtggtcacacagac
ccctgtgtgctgcgtttccaggtgttgctagaaaatcccttacagttttttcaagctgag
ctacaagtaatagacataaatgaccattccccagtattcgtagacagagatatgttgcta
aaaatatcagagagcagtccacctggaactacatttccactgaagaacgctcaggatgtg
gacgtaggccgaaataatattgagacctatataatcagtcccaactcttactttcgcgtc
ctcacccgcaagagcagtgatggcagcagatatcctgagttggtgctggataaagcgcta
gatcgagagcaggaacctgagctcaggttaacccttacagctcaggatggcggctctcca
cccaggtctggcatcgctcagatcaacattgaagtcgtggacatcaatgataacgcccct
gaatttgagcagtctctctatagggtgaaaattcctgaggacagtccgataggcttcctg
attgtcacagtctctgctacggatgcagacataggagtcaacggagagatttcctattca
cttttccaggcttctgaagagatttgcaaaacctttgaaatcaattccatgacgggagaa
attcgacttaaaaaacaacttgattttgaaagaatacagttctatgaagtcaatattgag
gccagagattctggcagcttttctggaaaatgcaccgtcctgactcaagtcttggatgtg
aacgacaatgccccagaaatcaccatgtctgcatttactagacacatacctgagaactcg
cctgaggctatggttgcagttttcagtgtttcagaccttgattcggaagaaaatgggaaa
ataaattgcacaattcaggacgatctaccctttctcctgaaatcttccttagaaaatttt
tacaccctggtaacagagagacccctggacagagagagccaggccgagtacaacatcacc
atcaccgtcaccgacttagggacccccaggctgaaaacgcagcacaacataaccgtgacg
gtctccgacgtcaacgacaacgcccccgccttcagccaaactacctacaccctgcgcatc
cgcgaaaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctg
gcctccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttc
gtgctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgag
gcgcgggcagacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcg
tctgcgggtcgcttctcggggcccgagggccactttccgggccacctggtggacgtcagc
ggcgcggggacgctgtcccagagctaccagtatgagactaaaatactactctggaccagt
agatccaaagttcttatagaagcactgacctactatctgggtgagacaccacagttaatc
ttcactgggagtaatacagcctga
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