Prionailurus viverrinus (fishing cat): 125171890
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Entry
125171890 CDS
T09889
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04622
RIG-I-like receptor signaling pathway
pviv05161
Hepatitis B
pviv05162
Measles
pviv05164
Influenza A
pviv05168
Herpes simplex virus 1 infection
pviv05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125171890 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
125171890 (IFIH1)
05171 Coronavirus disease - COVID-19
125171890 (IFIH1)
05164 Influenza A
125171890 (IFIH1)
05162 Measles
125171890 (IFIH1)
05168 Herpes simplex virus 1 infection
125171890 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pviv04054
]
125171890 (IFIH1)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125171890 (IFIH1)
Pattern recognition receptors [BR:
pviv04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
125171890 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SNF2-rel_dom
SWI2_SNF2
Cas3-like_C_2
Sigma70_ner
DUF3638
NrS1-pol-like_tail
Arg_decarbox_C
Motif
Other DBs
NCBI-GeneID:
125171890
NCBI-ProteinID:
XP_047725070
LinkDB
All DBs
Position
C1:65459166..65514556
Genome browser
AA seq
1026 aa
AA seq
DB search
MSNGYCADRSFCYLLSCFRTRVKTYIQVEPVLDYLTFLPADLKEQIQRTAVTAGNIHAAE
LLLSTLEKGVWPPGWARQFVVALQRAGSVLAARYLNPELTDLPSPSSENAHDECLQLLNL
LQPSLVDRILVKDVLDKCVEEKLLTNEDRNRISAAESNGNESGVRELLKRIVQKENWFSA
FLTVLRQTENYALVEELTGTTCFGSNAGTESLSQEDGPEVKEGVLVATGQLSPDKEGRDT
ETHSLESSFADPCVTSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSEEEHVAERA
SPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQILENS
LLNSEIGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVIP
LPQILGLTASPGVGGAKRQAEAKEHILKICANLDACTIKTVKENINQLKGQIKEPCKKFA
IADDTREDPFKDKLVEIMTRIQSFCEMSPMSDFGTQPYEQWTIQMEKKAAREGNRKDRVC
AEHLRKYNEALQINDTIRTIDAYNHLEAFYNDEKEKKFAVQEDDSDESGEEGNDDGNEDE
DDDKKPLRVDKTDRFLMDLFIENNRMLKKLAENPKHENEKLTKLRNTIMEQYTRTEESAR
GIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGV
IEREIVNDFREKMMYKAIDHVQNMNPEEYAHKILELQMQSIMEKKMKIKRSITKYYKENP
SLINFLCKNCGVVACSGEDIHVIEKMHHVNMTPIFKELYIVRENKALRKKFVDYQTNGEI
ICKICGQAWGTMMVHKGLDFPCLKIKNFVVVFKNNSPKKQYKKWVELPITFPDLDYSEYC
LLSDED
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggatattgcgcagacaggagtttctgctacctcctctcgtgtttcaggacc
agagtgaaaacgtacatccaggtggagcccgtactggactacctgacctttctccctgca
gacttgaaggagcagattcagaggacggccgtcaccgctgggaacatacacgcagcggaa
ctgcttctgagcaccttggagaagggagtctggcccccaggctgggctagacaatttgtg
gtggcccttcagagagcaggcagcgttttagccgcccgctacctgaacccagagctcacc
gacttgccctctccatcctctgagaacgctcatgatgagtgtctccagctgctgaacctc
cttcagccctccctggtggacagaattctggttaaagatgtcttggataagtgtgtggag
gagaaactgttgacaaacgaagacagaaatcggatttctgctgcagaaagcaatggaaat
gaatcaggtgtaagagagctactgaaaaggatcgtgcagaaagaaaactggttttctgca
tttctgactgttttgcgtcaaacagaaaactatgcccttgtcgaggagctaacaggcacc
acttgctttggaagcaatgcagggactgagagtttatcacaagaagatggccctgaagtt
aaagagggggttcttgtagccacgggtcagctgagtccagacaaagaaggtcgggacacg
gagactcactcactggaatcgtcttttgcggatccttgtgtaacttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagaggaagaacatgtggcagaaagagca
tcccctgagccagaactgcatctcaggccctaccaaatggaagttgcccaaccagccttg
gaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggccgtt
tacattgccaaggatcacttggacaagaagaaaaaagcatctgaacctggaaaagttata
gtccttgtcaataaggtaccactagttgaacagctcttccgcaaagagtttgaaccattt
ttgaagaaatggtatcatactattggattaagtggtgatacccaattgaaaatatcattt
ccagaagttgtcaaaacctatgatgttatcatcagtacagcccagatccttgaaaactcc
cttttaaactcagaaataggagaagatgatggtgtccagttgtcagacttttccctcatc
gttattgatgaatgccatcacaccaacaaagaagcagtctataataacatcatgaggcgt
tacttgaaacagaagttgaaaaacaataaactcaagaaagaatgcaaaccagtgattccc
ctacctcagatactaggactgacagcttcaccaggtgttggaggagccaaaaggcaagct
gaagccaaagaacatattttaaaaatatgtgccaatcttgatgcatgtaccattaaaact
gtgaaagaaaatataaatcaactcaaaggccaaataaaagagccatgcaaaaagtttgca
atcgcagatgacaccagagaagatccatttaaagataaacttgtagaaataatgaccagg
attcaaagtttttgtgaaatgagtccaatgtcagattttggaactcaaccctatgaacaa
tggaccattcaaatggaaaaaaaagctgcaagagaaggaaatcgcaaagaccgagtttgc
gcagagcatttgaggaagtacaatgaggccctacaaattaatgatacaattcgaacgatt
gatgcttataatcacctggaagctttctataatgatgaaaaagaaaagaagtttgcagtc
caagaagatgatagcgatgagagtggtgaggagggtaacgatgatggtaacgaagatgag
gatgatgacaagaagcctttgagagtggataagacagatagatttctcatggatttattt
atagaaaacaatagaatgttgaaaaagctggctgaaaacccaaaacatgaaaatgagaag
ctgaccaaattaagaaacaccataatggaacaatacacaaggactgaggaatcagcccga
ggaataattttcacaaaaacacgacagagtgcatatgccctttcccagtggattactgaa
aataaaaaatttgctgaagttggcgtcaaagcccatcatctgattggagctggacacagc
agtgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaattccgcact
ggaaaaataaatctgcttatcgctaccacagtggcagaagaaggtctggatattaaagaa
tgtaatattgttatccgttatggtctcgtcactaatgaaatagccatggtccaggcccga
ggtcgagccagagctgatgagagtacctacgtcctggttgcccacagtggttcaggagtt
attgaacgtgagatagttaatgatttccgagagaaaatgatgtataaagctatagaccat
gttcaaaatatgaacccagaggagtatgctcataagattttggaattacagatgcaaagt
ataatggaaaagaaaatgaaaatcaagagaagtatcacaaagtattacaaggaaaaccca
tcgttaataaatttcctctgcaaaaactgtggtgtggtagcctgctctggggaagacatc
catgtaattgagaagatgcaccatgtcaacatgacaccaatattcaaggaactctacatt
gtgagagaaaacaaagccctacgaaagaagtttgtagactatcaaacaaatggcgagatt
atctgcaaaatatgtggccaagcttggggaacgatgatggtgcacaaaggcttagatttt
ccttgtctcaaaataaagaattttgtagtggttttcaaaaataattcaccgaagaaacaa
tacaaaaagtgggtggaattaccgatcacgtttcctgatcttgactattcagaatattgt
ttgttaagtgatgaggactaa
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