Prionailurus viverrinus (fishing cat): 125171988
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Entry
125171988 CDS
T09889
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04360
Axon guidance
pviv04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125171988 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
125171988 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pviv04040
]
125171988 (TRPC4)
Ion channels [BR:
pviv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125171988 (TRPC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125171988
NCBI-ProteinID:
XP_047725303
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All DBs
Position
A1:complement(16378432..16583005)
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AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQATKESSNSADSDEK
SDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRKVNFVT
DIKNFGLFHRRSKQNAAEQNANQIFSVSEEVARQQAERPLERNIQLESRGLASRGDLNIP
GLSEQCILVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYD
GNLTDTATHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcggaatccgaactctcaccatcagaaaaagcctacttaaatgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagccgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcatcgaactacttttaagctttaatgtctatgttggagatgctcta
ttacacgctattaggaaagaagttgttggagctgttgagctgttactgaatcacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattatgagataataaagctt
ttagttcagaaaggagtttcggtgcccagaccccacgaggtccgctgtaactgtgtcgaa
tgcgtctccagttcagatgtggatagcctccgccattcacgctcaagactcaacatctac
aaggccttggccagcccctctctcatcgcactgtcaagtgaagaccctttcctcacagcc
tttcagttaagttgggagcttcaggaactgagtaaggtggagaacgaattcaagtcagag
tatgaagagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agctccagagaactggaaatcattcttaattacagagatgacagtagtctcatagaagaa
caaagcggaaatgatctcgcaagactaaaattggctataaagtaccggcaaaaagagttt
gttgctcagcccaactgtcaacaactgcttgcatctcgctggtatgatgagttcccgggc
tggaggagacgacactgggcagtgaagatggtgacgtgtttcataataggactccttttt
cccgtcttctctgtgtgctatcttatagctcctaaaagcccactgggactgttcatcaga
aagccctttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggtttcatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacaatctctttgaaaatcgttgcatttgtaaagtacagt
gctctgaatccacgagaatcttgggacatgtggcatcccactctagtggctgaagcttta
tttgccatcgcaaacatcttcagttccctgcgcctgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagttccta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcaattgtatttctat
tatgaagaaacaaaagggttaagctgtaaaggcatacgatgtgaaaagcagaacaatgca
ttttcaacgttatttgagacactccagtccctattttggtcaatatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgttggtgccacgatg
tttgggacatacaatgtcatctctctggtggtcctactcaacatgttaatagctatgatg
aataattcgtaccaactcattgctgaccatgcagatatagaatggaagtttgctcgaaca
aagctttggatgagttatttcgaagaaggaggtactctgcccactcccttcaatgtcatc
ccgagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagcctgaaagttttggaacaatagggaggcgagctgctgataatttg
agaagacatcaccagtatcaagaggttatgcggaacctggtgaagaggtatgttgccgca
atgatcagagatgccaaaactgaagaaggtctgactgaagagaactttaaggaactaaag
caagacatttctagtttccgctttgaagtcctggggttactaagaggaagcaagctctct
accgtccagtcggctcaggccacaaaggagtcctccaactctgcggactcggatgaaaag
agtgacaacgaaggcagtagcaaagacaagaaaaagaacttcagccttttcgatttaacc
accctgattcacccgcgatcggcagcgattgcctccgaaagacacaacatcagcaatggc
tccgccctagtggtgcaagagcccccaagagagaagcagagaaaagtgaactttgtgacc
gatatcaaaaacttcgggttatttcacagacggtcaaaacaaaacgctgctgagcaaaat
gcaaaccaaatcttctctgtttcagaagaagttgctcgtcagcaggccgaaagaccacta
gagaggaatattcaactggaatcccgagggttagcttcgcggggtgacttgaacatccct
ggtctcagtgaacagtgcatcttagtagaccatcgagaaaggaatacggacaccctgggt
ttacaggtgggcaagagagtgtgttccttcaagtcggagaaggtggtggtggaggacact
gttccaataataccaaaggagaagcacgcaaaggaagaggactccagtatagactatgat
ggaaacctcacggacacagccacccacgaagattatgtgaccacaagattgtga
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