Prionailurus viverrinus (fishing cat): 125172118
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Entry
125172118 CDS
T09889
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125172118 (YBX1)
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125172118 (YBX1)
03041 Spliceosome [BR:
pviv03041
]
125172118 (YBX1)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
125172118 (YBX1)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125172118 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
125172118 (YBX1)
Spliceosome [BR:
pviv03041
]
Common components
Common spliceosomal components
General mRNP proteins
125172118 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
125172118
NCBI-ProteinID:
XP_047725610
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All DBs
Position
C1:complement(181170474..181190849)
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AA seq
324 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKAADPPAENSSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgctgccgacaccaagcccggcaccacgggcagcggcgcagggagcggcggcccgggc
ggcctcacatcggcggcgcctgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaagaaacggatatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagcaaatgttacaggccctggtggagttccagtgcaaggcagtaaatatgcagca
gaccgtaaccattatagacgctatccacgtcgcaggggtcctccacgcaattaccagcag
aactaccagaatagtgagagtggggaaaagaacgagggatcggagagtgctcccgaaggc
caggcccaacagcgccggccctaccgcaggcgacggttcccaccttactacatgcggaga
ccctatgggcgtcgaccacagtattccaaccctcctgtgcagggagaagtgatggaaggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggt
tatagaccacgattccgcaggggtcctcctcgccaaagacagcctagagaggacggcaat
gaagaagataaggaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcgg
taccgccgtaacttcaattaccgacgcagacgcccagaaaaccctaaaccacaagatggc
aaagagacaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcag
ggcggggctgagtaa
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