Prionailurus viverrinus (fishing cat): 125172445
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Entry
125172445 CDS
T09889
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125172445 (PMS1)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125172445 (PMS1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125172445
NCBI-ProteinID:
XP_047726477
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All DBs
Position
C1:complement(39963638..40062699)
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AA seq
925 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKATDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQ
YVLDGSGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYG
ILKHDLRIVFIHNKAVIWQKTRVSDHKMALMSVLGTAVMGNMESFQYHCEESQIYLSGFL
PKQDADHSFTSLSTPERSFIFINSRPIHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPGTNENNKTDVSSADMVVSN
TTETDVLFNKMESSGNNYPNVDTSAIPFQNDVHNDKSGKNTNYCLSHQLHVDDHYDDHFN
SENSNIDKNTRNTFQEIPVNNLSCEDAQKECSETCFVDSVKHTQSENGNKSNRDESGKNK
EAAGPEKSLEICADDWSKGNTLKNSMGENIEPVKILVPQESSPCKLSNNTSPSPEQKNLS
EGSCNKKSNVVDNKSGQLTAYDLISNRVIKKPMSASALFVQDHRAQFLTEKLEDATVQIE
ELWKTLSEEEKLKYEEKATKDLERYNKQIKRAIEQESQMPLKDGRKKIKPTSAWHLAQKH
KLKTSLSNQPKLEDLFQCQIEKRKNQNVKIVQIPFSMENLKKNFEKHKFDLEEKDEFCLI
HNLKFPDGWLITSKTEVMLLNPYRVEEALLFKRLIENHKLPAEPLEKPIILTESLFNGSH
YLEILCKMTTDDQRHSGSTYLSDPRLTANGFKIKLIPGVSIAEDYLEIEEMANCLPFYGV
MDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIMYRMKHE
FGNEIKGCVHGRPFFHHLIHIPEAT
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagtgcgcctcctttcaagttctcagataatcacttca
gtggtcagtgttgtgaaagagctcattgaaaactccttggatgcaggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaggtgcgagacaatggtgagggt
atcaaggccactgatgcacctgtaatggcaatgaaatactacacttcaaaaataaatagt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagcattggggtcaatt
tgttgtgtagctgaggttttgattacaacaaggacagcttctgataattttagcacccag
tatgttttggatggcagcggccacataatttctcaaaaaccttcacatcttggtcaaggt
acaactgtgactgctttaagattgtttaagaatctacctgtaagaaagcagttttactca
actgctaaaaaatgtaaagatgaaataaaaaagatccaggatctcctcataagctatggt
atacttaaacatgacttaaggattgtttttatacataacaaggcggttatttggcagaaa
actagagtatctgatcataagatggctctcatgtctgttctggggactgctgttatgggc
aacatggaatcctttcagtaccactgtgaagaatctcagatttatctaagtggatttctt
ccaaagcaagatgcagaccactcttttacaagtctttcaaccccagaaaggagttttatc
tttataaacagtcgaccaatacatcaaaaagacatattaaagctaatccgacattattac
aatctgaagtgcctaaaggaatccactcgtttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtggatgtaaatttaacaccagataaaagtcaagtattattacag
aataaggaatctgttttaattgctcttgaaaatctgatgacgacttgttacggatcacta
cctggtacaaatgaaaataataaaacagatgtttcctcagctgacatggttgttagtaat
acaacagaaacagatgtgctttttaataagatggaatcatctggaaataattatccaaat
gttgatacttcagccattcctttccaaaatgatgtgcataatgataaatctgggaaaaac
actaattattgtttaagtcatcagctacatgttgatgaccattatgatgatcattttaat
agtgaaaattctaacattgataagaacactagaaatacatttcaggagatcccagtgaat
aatttatcatgtgaggatgctcagaaggaatgtagtgaaacttgttttgtagattctgtt
aagcacacccaatcagaaaatggcaataaaagcaatagagatgagagtgggaaaaataag
gaagcagcaggtcctgagaagtctttggaaatctgtgcagatgactggagcaagggaaat
acacttaaaaattcaatgggagaaaatattgaacccgtgaaaattttagtgcctcaagaa
agttcaccgtgtaaattaagtaataatacttctccaagccctgaacaaaagaatctcagt
gaaggttcctgtaacaaaaaatcaaatgtggtagacaacaaatctggacagcttacagct
tatgacttaattagcaatcgagtaatcaagaaacccatgtcagcaagtgccctttttgtt
caagatcatcgtgctcagtttctcacagaaaagctggaggatgcaacagtacaaattgaa
gaactgtggaagacattgagtgaagaggaaaaactgaaatatgaagagaaggctactaaa
gatttggaacgatacaataagcaaatcaagagagccattgaacaagagtcacaaatgcca
ttaaaagatggcagaaaaaagataaagcccaccagtgcatggcatttggcacagaagcac
aaattgaaaacttcattatcgaatcagccaaaacttgaagacctttttcagtgccaaatt
gaaaaaagaaagaaccaaaatgttaaaatagttcagatccccttttctatggaaaactta
aaaaaaaattttgagaaacataaatttgacttagaagagaaggacgaattttgcttgatc
cacaatctcaagtttcctgatgggtggctaattacatccaaaacagaggtaatgttatta
aatccttacagagtagaagaagccctcctatttaaaagacttattgagaatcataaactt
cctgcagagccactggaaaagccaattatattaacagagagtctttttaatggatctcat
tacttagagattttatgtaaaatgaccacagatgatcagagacacagtggatcaacttac
ctgtctgatcctcgtcttacagcaaatggtttcaagataaaattaataccaggtgtttcc
attgctgaagactacttggaaatagaggaaatggctaattgtctcccattctatggagtg
atggacttaaaagaaattcttaatgccatattaaacaaaaatgcaaaggaagtttatgaa
tgtagacctcgtaaagtgataagttatttggagggagaagcagtgcgtctatctagacag
ttgccgatgtacttgtcaaaagaggacatccaagacattatgtacagaatgaagcacgaa
tttggaaatgaaattaaagggtgtgttcatggtcgcccattttttcatcatttaatccat
attccagaagctacctaa
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