Prionailurus viverrinus (fishing cat): 125172458
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Entry
125172458 CDS
T09889
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03013
Nucleocytoplasmic transport
pviv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125172458 (SRRM1)
03015 mRNA surveillance pathway
125172458 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125172458 (SRRM1)
03041 Spliceosome [BR:
pviv03041
]
125172458 (SRRM1)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125172458 (SRRM1)
Spliceosome [BR:
pviv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125172458 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
125172458
NCBI-ProteinID:
XP_047726523
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All DBs
Position
C1:complement(196205306..196237968)
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AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGRRRRTPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAVKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAVTPAAIAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagttactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggatatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacaaagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcggagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcggtct
ccccgccacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaacctgaacctgtaccagaacctaaagaaccttct
ccagagaagaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacgg
cgtcatagatcccgatcaagatcatactccccgagaaggcggccaagcccgagaaggcgg
ccatctcctcgaagaaggactccaccaagacgaatgccacctccacccaggcatagaaga
agtagatctccagtgagacgaagaaggcgttcatcagcgtccttgtctggaagtagttcg
tcatcttcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcggaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacacaaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccaatgactaaaagtggtagacgg
aggaggaccccctccccaccacccaccagaaggcgccgttctccttctcctgcccctcct
cctcgaaggcgcaggtctcccacaccgccacctcgacgaaggactccttctcctcccccc
cggcgccgctcaccttccccaagaagatactctcctccaatacagaggagatactctcct
tctccgcctccaaagagaagaacggcttctccacctccccctcctaaacgtagggcctcg
ccatctccaccaccaaagcgccgggtctcccattctccacctcccaaacaaagaagctcc
ccggtcaccaagagacgttcgccttcgttatcatcaaagcataggaaagggtcttccccg
agccgatctacccgggagccccggtcaccacaaccaaacaaacggcattcgccctcacca
cggcctcgagctcctcagacctcctcaagtcctccacctgttcgaagaggagcgtcatca
tcaccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaagaaggctgcctcaccaagccctcagtctgtaaggagg
gtttcatcctcccgatctgtctcaggatctcctgagccggcagttaaaaaacccccagca
cctcagtctcctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtc
aaaaaggctaaaagcccaacaccaagcccatctccggcaaggaactcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggccgtggctgcagccgctgcggctgctgtaacc
cctgcagccattgctgctcccacaaccacatcagcacaggaggaaccagaagcggagccc
gagcctaagaaggagaccgaaagcgagcccgaagacaacctcgatgacttagaaaagcac
ctgcgtgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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