Prionailurus viverrinus (fishing cat): 125172610
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Entry
125172610 CDS
T09889
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125172610 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125172610 (PRPF38B)
Spliceosome [BR:
pviv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125172610 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
125172610 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
125172610
NCBI-ProteinID:
XP_047726901
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All DBs
Position
C1:complement(121513269..121522810)
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AA seq
548 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRK
IKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREK
ERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDREREK
ENDRGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKD
SKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGR
TDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQ
HKNKDETV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgca
gccgcggcccagcagcagcagcagcagtgcggcggcggtggcgccaccaagccggcggtc
tcgggcaaacagggaaatgtgctgccgctgtggggcaacgagaagactatgaacctcaac
cccatgatcttgaccaatatcctgtcgtcgccttatttcaaagtgcagctctacgagctc
aagacctaccacgaggtggtggacgagatctactttaaggtcacacatgttgaaccatgg
gagaaaggaagcaggaaaacagcgggccaaacagggatgtgcggaggggttcgaggtgtt
ggaacaggaggaatagtttctacagctttctgcctgttatacaaattatttaccctgaag
ttaactcgcaagcaagtgatgggtctcataacacacacagactctccatatattagagct
cttggatttatgtatataaggtacacacagccccctacagatctatgggactggtttgaa
tccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgacc
attggagaaatgctacggtcttttctcacaaagctggagtggttttctaccctgtttcca
agaattccagttccagttcagaagaatattgatcaacagattaaaactcggcctagaaaa
atcaaaaaagatgggaaggaaggcgctgaggaaatagacagacatgttgaacgcaggcgt
tcgaggtctccaaggagatcactgagtccacggaggtccccaagaaggtcaagaagtaga
agtcatcatcgagagggccatgggtcttctagttttgaccgagaattagaaagagaaaaa
gaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcccga
agtatcgatcggggattagaacgcaggcggagcagcagaagcagggaaaggcatagaagt
cgtagtcgaagtcgggataggaaaggggaccgaagggacagggatcgggaaagagagaaa
gaaaatgatagaggtagaagacgagatcgtgactatgataaggaaagaggcaatgaccga
gaaaaggagagagagcgatcgagagaacggtccaaggaaaggagaagtagaggtgaggta
gaagagaagaaacacaaagaagataaagatgataggcggcacagagatgacaaaaaggat
tccaaaaaggagaaaaaacacagtaggagtagaagcagagaaaggaaacacagaagtagg
agtagaagtagaaatgcagggaaacgaagcagaagcagaagcaaagagaaatcaagtaaa
cataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaaggaaga
actgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatctaga
aagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccag
tctgacaaacacgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaacaa
cataaaaacaaagatgagactgtgtga
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