KEGG   Prionailurus viverrinus (fishing cat): 125172610
Entry
125172610         CDS       T09889                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125172610 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pviv03041]
    125172610 (PRPF38B)
Spliceosome [BR:pviv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    125172610 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    125172610 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 125172610
NCBI-ProteinID: XP_047726901
LinkDB
Position
C1:complement(121513269..121522810)
AA seq 548 aa
MANNSPALTGNSQPQHQAAAAAAQQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRK
IKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREK
ERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDREREK
ENDRGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKD
SKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGR
TDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQ
HKNKDETV
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgca
gccgcggcccagcagcagcagcagcagtgcggcggcggtggcgccaccaagccggcggtc
tcgggcaaacagggaaatgtgctgccgctgtggggcaacgagaagactatgaacctcaac
cccatgatcttgaccaatatcctgtcgtcgccttatttcaaagtgcagctctacgagctc
aagacctaccacgaggtggtggacgagatctactttaaggtcacacatgttgaaccatgg
gagaaaggaagcaggaaaacagcgggccaaacagggatgtgcggaggggttcgaggtgtt
ggaacaggaggaatagtttctacagctttctgcctgttatacaaattatttaccctgaag
ttaactcgcaagcaagtgatgggtctcataacacacacagactctccatatattagagct
cttggatttatgtatataaggtacacacagccccctacagatctatgggactggtttgaa
tccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgacc
attggagaaatgctacggtcttttctcacaaagctggagtggttttctaccctgtttcca
agaattccagttccagttcagaagaatattgatcaacagattaaaactcggcctagaaaa
atcaaaaaagatgggaaggaaggcgctgaggaaatagacagacatgttgaacgcaggcgt
tcgaggtctccaaggagatcactgagtccacggaggtccccaagaaggtcaagaagtaga
agtcatcatcgagagggccatgggtcttctagttttgaccgagaattagaaagagaaaaa
gaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcccga
agtatcgatcggggattagaacgcaggcggagcagcagaagcagggaaaggcatagaagt
cgtagtcgaagtcgggataggaaaggggaccgaagggacagggatcgggaaagagagaaa
gaaaatgatagaggtagaagacgagatcgtgactatgataaggaaagaggcaatgaccga
gaaaaggagagagagcgatcgagagaacggtccaaggaaaggagaagtagaggtgaggta
gaagagaagaaacacaaagaagataaagatgataggcggcacagagatgacaaaaaggat
tccaaaaaggagaaaaaacacagtaggagtagaagcagagaaaggaaacacagaagtagg
agtagaagtagaaatgcagggaaacgaagcagaagcagaagcaaagagaaatcaagtaaa
cataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaaggaaga
actgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatctaga
aagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccag
tctgacaaacacgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaacaa
cataaaaacaaagatgagactgtgtga

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