KEGG   Prionailurus viverrinus (fishing cat): 125172668
Entry
125172668         CDS       T09889                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03020  RNA polymerase
pviv03420  Nucleotide excision repair
pviv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125172668 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125172668 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125172668 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pviv03021]
    125172668 (POLR2D)
   03400 DNA repair and recombination proteins [BR:pviv03400]
    125172668 (POLR2D)
Transcription machinery [BR:pviv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125172668 (POLR2D)
DNA repair and recombination proteins [BR:pviv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125172668 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 125172668
NCBI-ProteinID: XP_047727045
LinkDB
Position
C1:complement(106279310..106294917)
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggaggtagcgatccgcgggccggcgacgtagaggaggatgcctcacagctt
atctttcccaaagagtttgaaacagcggagacactactaaattcagaagttcacatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaaaactttaaattacacagcccgtttcagtcgtttcaaaaacagagagactatt
gccagtgtccgcagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtcgaaggctctgatcccaagcctggagggg
cggtttgaagatgaggagctgcagcagattcttgatgatatccagaccaagcgcagcttt
cagtattaa

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