Prionailurus viverrinus (fishing cat): 125172981
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Entry
125172981 CDS
T09889
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125172981 (CLSTN1)
Cell adhesion molecules [BR:
pviv04515
]
Cadherins
Cadherin related
125172981 (CLSTN1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
Cadherin_C_2
PFF1_TM
SID-1_RNA_chan
Zip
Motif
Other DBs
NCBI-GeneID:
125172981
NCBI-ProteinID:
XP_047727638
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All DBs
Position
C1:207631156..207718928
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AA seq
980 aa
AA seq
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MLRRPALAPAPAAWLLLAGLLSGGGVWATRVNKHKPWLEPTYHGIVTENDNAVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGQGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYD
SILRVEAVDADCSPQFSQICSYEVVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTITAY
DCGKRRAAEDVLVKVSVKPTCSPGWQGWNKRVEYEPGTGSLALFPNVHLETCDEPVASVQ
ATVELETGHIGKGCDRDTYSEQSLHRLCGAASGTTELLPSPSGSLNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLTFLLRQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVELPSVTLYVDGVSHE
PFSVTEDYPLHPSRIETQLVVGACWQEYPAFENDNETEPVPMAPAGGDLHMTQFFRGNLA
GLTVRSGKLADKKVIDCLYTCKEGLDLQAPEDGRGVKIHTNPSQLALTLEGDDVGELDKA
MQHIAYLNSRQFPTPGIRRLKLTSTVKCFNEAPCISVPPVDGYVMVLQPEEPKISLSGVH
HFARAASEFESPEGVFLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIVHDLDTCE
VTVDGEELNPAQESLEVDMARLQQKGIAVSASDLGMVFTGVDTMASYEEVLRLLRYRNWH
TRSLLDRKFRLVCSELNGRYISNEFQVEVNVIHTAGPMEHASHMAAQPQFVHPERHAFVD
LSGHNLASPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEM
DWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEAGEEEDDITSAESESSEEEEGEHG
DQQSANRQQQLEWDDSTLSY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgctcgcgccggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcggggtctgggccacgcgagttaacaagcacaagccgtggctcgagccc
acctatcatggcatcgtcacagaaaacgacaacgcggtgctcctcgaccctccgctgatc
gccctggataaagacgcacctctgcggttcgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcagaatgtcccctttgatgcagtggta
gtggataagtccactggcgagggaataattcgctcaaaagagaaactggactgtgaacta
cagaaagactacacattcaccatccaggcctatgactgcggccaggggccggatggcgcc
aacgcgaaaaagtctcataaagcaactgtccatattcaggtgaacgatgtgaacgaatat
gcacctgtgttcaaggagaagtcctacaaagcgaccgtcatcgaggggaagcagtatgac
agtatcctgagggtggaggccgtggacgctgactgctccccccagttcagccagatatgc
agctatgaagtcgtcactccagacgtgccgtttgctatcgacaaagatggttacataaaa
aacacagagaagctaaactatgggaaagaacaccagtacaagctgaccatcaccgcctac
gattgcgggaagagaagggcagcggaagacgtcttggtgaaggtcagcgtcaagcccacc
tgctcccccgggtggcaaggatggaacaagagggtcgagtatgagcctggcacgggctct
ttggccctcttcccaaatgtgcacctggagacgtgcgacgaacccgtggcctcagtgcag
gcgacggtagagctggagaccggccacatcgggaaaggctgtgaccgtgacacctactct
gagcagtctcttcaccggctgtgtggcgctgcgtctggcaccaccgagctgctcccgtcc
cccagtgggtccttgaactggactgtcggcctccccactgacaacggccacgacagtgac
caggtcttcgagttcaacggcacccaagcagtgaggatcccagatggtgtcgtttctgtc
aacccgaaagagccttttacgatttctgtgtggatgaggcatgggccttttggcaggaag
aaggagaccattctctgtagttcagacaaaacagacatgaaccggcaccattattcactc
tacgtccacggctgccgcctcactttcctcctccgtcaggatccttcagaagagaagaaa
tacaaacctgcagaattccactggaaattgaatcaggtctgtgatgaggagtggcatcac
tacgtcctcaacgtggagctcccgagcgtgactctctatgtggacggtgtttctcacgag
cccttctctgtgaccgaagattacccgcttcatccatccaggattgaaacccagctcgtg
gttggggcttgctggcaagagtatccagcatttgaaaatgacaatgaaaccgagcctgtg
cctatggcccctgcaggtggcgacctgcacatgacccagtttttccggggtaatctggct
ggcctgactgtccgttctgggaaactcgcagataagaaggtgattgactgtctgtacacc
tgcaaagaagggctggacctgcaggcccccgaggacggcagaggcgtgaagatccatacc
aaccccagtcagttggcgttgaccttggagggagatgatgttggggagctggataaagcc
atgcagcacatcgcctacctgaactcacggcagttccccacacctgggatccggagactc
aaactcaccagcacagtcaagtgttttaatgaagctccttgcatctcggtgcccccggtg
gatggttacgtgatggtgttgcagccagaggagcccaagatcagcctgagtggggtccac
cattttgctcgagcggcttctgaatttgaaagcccagagggggttttccttttccctgag
cttcggatcatcagcaccatcacgagagaagtggagcccgaaggggacggggacgaggac
cccacagttcaagagtcgctcgtgtccgaggagatcgtgcatgacctggatacctgcgaa
gtcaccgtggacggggaggaactgaacccagcgcaggagagcctggaggtagacatggcc
cgcctgcagcagaagggcatcgcggtgagcgcctccgacctgggcatggtcttcacaggc
gtggacaccatggccagctacgaggaggttctgcgcctcctccgctatcggaactggcac
accaggtccctgcttgaccgcaagttcaggctcgtctgctcagagctcaatggccgctac
atcagcaacgagtttcaggtggaggtgaacgtcattcacacggccggccccatggagcac
gccagccacatggccgcccagccgcagttcgtccacccggagcgccatgccttcgtcgat
ctctcgggtcacaacctggccagcccccacccgttcgcagttgtccccagcaccgccact
gttgtcattgtggtgtgtgtcagcttcttggttttcatgattatcctgggagtcttccgg
atccgggctgctcatcagcgaaccatgcgggaccaggacaccgggaaggagaacgagatg
gattgggatgactccgctctgaccatcaccgtgaaccccatggagacgtacgaggaccag
cacagcagcgaggaggaggaggaggaggaagaggaggaggagagcgaagccggggaggag
gaggatgacatcaccagcgccgagtcggaaagcagcgaggaggaggagggggagcacggg
gaccagcagagcgcgaaccggcagcagcagctggagtgggacgactccaccctgagctac
tga
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