Prionailurus viverrinus (fishing cat): 125173383
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Entry
125173383 CDS
T09889
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04340
Hedgehog signaling pathway
pviv05200
Pathways in cancer
pviv05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125173383 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125173383 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
125173383 (PTCH2)
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GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
125173383
NCBI-ProteinID:
XP_047728405
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All DBs
Position
C1:179193213..179208503
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AA seq
1275 aa
AA seq
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MAGPPPLQELPPVYTPPARAASPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTPH
QEGENILTPEALGLHLQAALAASKVQVSLYGKSWDLNKICYKSGIPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLKELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPTAPNHHSKQAPNVAQELNGGCHGFSHKFMHWQEELLLG
GMARDAQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLRAWQRRFV
QLAQEALPQNSSQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMVGPAPGTLPHPLPGA
QPGSCFPRLCPPSPQLAYACVTMLRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIA
FNAATTQVLPFLALGIGVDDIFLLAHAFTEAPPGTPLQERTGECLRRTGTSVALTSINHM
VAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVFPAVLSLDLHRRHCQRLDVLCCFSR
YRPCIPTPPGLISSGPITSCPLTSISTDLPPPLSASSSPCSARVIQILPQELGDRTVPVG
IAHLTATVQAFAHCEASSQHVVTILPPRAHLVPPPSDPLGSELFSPGGSTRDLLGQEEGT
RQKATCNSLPCARWNLAHFARYHFAPLLLQSHSKAMVLVLFGALLGLSLYGATLVQDGLA
LTDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPP
PATQAPRTWLHYYRNWLQGIQAAFDQDWASGRITRHSCRNGSEDGALAYKLLIQTGDAQE
PLDFSQLTTRKLVDKEGLIPPELFYVGLTMWVSSDPLGLAASQANFYPPPPEWLHDKYDT
TGENLRIPAAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACTEAGRAGVRAYPSGSPFL
FWEQYLGLRRYFLLAICILLVCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGI
KLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNLRAACALEHTFAPVTDGAVSTLLG
LLMLAGSNFDFIIRYFFVVLTVLTLLGLLHGLMLLPVLLSILGPPPEVVQIYKESPEVLS
PPAPREGGLRWGLSPTLPQSFARVTTSMTVALHPPPLPGAYIHPASDEPTWSPVATPAAS
GSNNLSSRGPCPATG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggctgggccgccgccactccaggagctgccccctgtctatacacccccagctcgagcc
gcatcaccccagatcctagctgggagcctaaaggctccactctggcttcgtgcttacttc
cagggcctgctcttctctctgggctgcgggatccagagacactgtggcaaagtgctcttc
ctgggcctgttggcctttggagccctggcactgggtctccgtgtggccatcattgagaca
gacctagaacagctctgggtggaagtgggcagccgggtgagccaggagttgcattacacc
aaggagaagctgggggaagaggctgcgtacacctcccagatgttgatacagaccccacac
caggagggggagaacatcctcacgcctgaggcactgggcctccacctccaggcagccctt
gcagccagtaaagtgcaagtatcactctatggaaagtcctgggatttgaataaaatctgc
tacaagtcaggaattcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcacccccctcgactgcttctgggagggagccaaactccaaggg
ggctctgcctacttgcctggtcgtcctgacatccagtggaccaacctggatccagagcag
ctgctcaaggagctgggcccttttgcctcccttgagggcttccgggagctgttagacaag
gcacaggtgggccaggcctatgtggggcggccctgtctgcaccctgatgacctccactgc
ccacctactgcccctaaccatcacagcaagcaggctcccaatgtggctcaggagttgaac
ggtggctgccatggcttctcccacaagttcatgcactggcaggaggaactgctgctgggg
ggcatggccagagacgcccaaggacagctgctaagggcagaagccctgcagagcaccttc
ttgctgatgagtccccgccagctgtatgagcacttccgaggcgactaccagacacacgac
atcggctggagcgaggagcaggctggcacagtgctgagggcctggcagcggcgctttgtg
cagctggcccaggaggccctgcctcagaattcatcccagcagatccacgccttctcctcc
accaccctggatgacatcctgcatgctttctctgaagtcagtgctgcccgtgtggtggga
ggctatctgctcatggtgggtcctgctcccggcaccttaccccaccctctgcccggtgct
cagccaggaagctgctttccaagactgtgccctccttccccacagctagcctatgcctgt
gtgacgatgctgcgctgggactgtgcccagtcccagggtgctgtaggccttgcaggggtg
ctgctggtagccctggcagtggcctcgggcctcgggctctgtgccctgcttggcatcgcc
ttcaacgctgccactacccaggtgctgcccttcttggcactgggcatcggtgtggatgac
atattcctgctggcacatgccttcacagaggctccacctggcacccctctccaggagcgc
acaggcgagtgtctgcggcgcacaggtaccagcgtcgcactcacatccatcaaccacatg
gttgccttcttcatggctgccctagttcccatccctgcactgcgggccttctccttgcag
gcggccatagtggttggctgcaactttgcagccgtgatgcttgtcttcccggcggtcctc
agcctggacctgcatcggcgccactgccagcgcctcgacgtgctctgctgtttctccagg
taccgtccctgcatccccaccccaccaggcctcatctcctcgggccccatcacttcctgt
cccctcaccagcatttccacagacctgccacccccactctctgcctcttccagcccctgc
tctgcccgcgtgattcagattctgccccaggaactaggggataggacagtaccagtgggc
attgcccacctgactgccacagttcaagcctttgcccactgtgaagccagcagccagcat
gtcgtcaccatcctgcctccccgggcccacttggtgcccccaccttctgacccactgggc
tctgagctcttcagcccaggagggtccacacgggaccttctaggccaagaggaggggaca
aggcaaaaggcaacgtgcaattccctgccctgtgcccgctggaatcttgctcatttcgcc
cgctatcattttgcacccttgctgctccagtcacacagcaaggccatggtgctggtgctc
tttggggctcttctgggcctgagcctctacggagcaaccttggtgcaggatgggctggcc
ctgacagatgtggtgcctcggggcaccaaggagcatgccttcctgagcgcccagctcagg
tacttctccctgtacgaggtggccctggtgacacagggtggctttgactacgcccactcc
caacgcgccctctttgatctgcaccagcgcttcagttctctcaaggccgtgctgcccccg
cctgccacccaggcgccccgcacctggctgcactattaccgcaactggctacagggaatc
caggccgcgtttgaccaggactgggcttctgggcgcattacccgccactcatgccgcaat
ggctctgaggatggggccctggcctacaagctgctcatccagaccggggatgcccaagag
cctctggatttcagccagttgaccacaaggaagctagtagataaggaggggctgatccca
cccgaactcttctacgtggggctgaccatgtgggtaagcagtgacccactgggcctggca
gcctcacaggccaacttctaccccccacctcccgagtggctgcacgacaaatatgacact
acgggggagaaccttcgcatcccggcggcccagcccctggaatttgcccagttccccttc
ctactgcatggcctccagaagactgcggacttcgtggaggccattgagggggcccgagca
gcgtgcaccgaggcaggccgggccggggtgcgtgcctaccccagtggctcccccttcctc
ttctgggagcagtatctgggcctgcggcgctactttttgctggctatctgcatcctgctg
gtatgcactttcctcgtctgtgccctgctgctgctcaatccctggacagctggtctcata
gtactggtcctggcgatgatgactgtggagctctttggcatcatgggtttcctgggcatc
aaactgagtgccatccctgtggtgatccttgtggcctctgtaggcattggtgtcgagttc
acagtccatgtggctctgggcttcctgaccacccagggtagccggaacctgcgggctgcc
tgtgccctagagcacacatttgctcccgtgaccgatggggccgtctccacattgctgggt
ctgcttatgcttgctggttcgaactttgacttcatcataaggtactttttcgtggtgctg
acagtgctcacactcctgggcctcctccatgggctcatgctgctgcctgtgctgctgtcc
atcctgggccccccaccagaggtggtacagatatacaaggagagcccagaggtcctcagc
cctccagctccacgggaaggaggactcaggtgggggttgtcccccaccctgccccagagc
tttgccagagtgactacctccatgacagtggccctccacccacccccgctgcctggtgcc
tacatccacccagcctctgatgaacccacttggtcccctgttgccacaccagctgccagc
ggctccaacaacctcagttctaggggaccatgtccagccactgggtga
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