Prionailurus viverrinus (fishing cat): 125173568
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Entry
125173568 CDS
T09889
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125173568 (DDX20)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125173568 (DDX20)
Spliceosome [BR:
pviv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125173568 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
125173568
NCBI-ProteinID:
XP_047728808
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All DBs
Position
C1:complement(118783471..118794516)
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AA seq
823 aa
AA seq
DB search
MAAAFEASAALATVEAAMPAERVAAQLAASEPPPGPVRSLRTAHDVSGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEYLANALTRYMRDPTFVRLNSSDPSLLGLKQYYRVVNSYPLAHKIFEEKAQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
VMMKIAQKCNINLLPLPDPIPPGLMEECSDWDVEVQAAMHTYGLASVPTQPLKKQIQKIE
RTFSTPKAHGNHVASSRNTSVSALLVKSKNNTKQKLPVKSHSECGIIEKAVSPKEVGCGI
QLEEPMKNSVQISVENSTGQQQVKEAIPVSLPKIPCLSSFKIHLPYSLTFSELVEDYEHY
IKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRIPEERVQVLASSSQSGDSESDSDSYSS
RTSSQSKGNKSYLEGSSDTQPKDAESTRVDGHISLEQPLNGNNIPNPVEYQESPEIQTKA
RHKEGATQRAKQSRRNPPRRSSYRMQTEPQEDGWYDCHRETHLNFSETYQDYEEYWRAYY
RAWQEYYAAASQSYYWNAQRHPSWVAAYHMNTIYLQEMMRGNQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagcctcagcggccttagcgacggtggaggccgctatgccggcg
gagcgtgtggccgcacagctcgcggcctcggagccaccccccgggccggtgcggagcctg
cggacggctcacgacgtcagcggcccacggacccgcacgggggacgtgctgctggccgag
ccggccgacttcgagtcgctgctgctgtcgcggccggtgctggaggggctgcgggctgcc
ggcttcgagcgaccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctc
gatttaatagttcaagctaaatctggcaccgggaaaacgtgtgtgttctctaccattgct
ttggactctctggttcttgaaaacctaagtacccagattctgatcttggctcctacaaga
gaaattgctgtacagatacattctgttattacagctattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggactccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggctctcctggcagaattaaacaactaatagaacttgactacttg
aacccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaactggatttattcttccttgcctgcaagtaaacagatgttg
gccgtatcagccacctaccctgaatatttggctaatgctttgacaaggtacatgagagat
cccacttttgtaagactaaattccagtgatccgagtctcctaggtttgaagcaatattac
agagttgtcaattcataccctttggcccataagatttttgaggaaaaggctcagcattta
caggaactgttcagcagaattccgtttaatcaggccttagtcttttctaatttgcacagc
agagcacaacatttggctgatattctttcttctaaaggctttcctgctgagtgtatttcg
ggtaacatgaatcagaatcagcgtcttgatgctatggccaagctgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgagggattgatgctgagaaggtgaacctg
gttgtaaatctggatgtaccattggattgggagacatacatgcatcggattggcagagct
ggccgttttggtaccttggggttgacagtgacctactgttgtcggggagaagaagaaaat
gtgatgatgaaaattgcccagaaatgtaacatcaaccttctgcctttaccagatcccatt
cctcctggtctgatggaagaatgttcagattgggatgtggaggttcaagctgctatgcat
acatatggcttagcaagtgtacctacccagcccttaaaaaagcagattcaaaaaatagag
agaaccttttcaactccgaaagctcatggtaaccatgtggcttcatccagaaatacttct
gtatctgcactcttagtcaaatcaaaaaataataccaaacaaaagcttcctgtgaaaagc
cactcagagtgtggaatcatcgaaaaagcagtgtcaccgaaagaagtgggctgtggcata
caattggaagagccgatgaagaattctgttcagatctctgttgaaaactcgactggtcag
caacaggtcaaagaagctatacctgtgtcactccctaaaattccttgtctgtcgtccttt
aaaatccatctgccatactctttgactttttcggaattggtagaggattatgaacactat
attaaagaggggttagagaaacctgtggaaatcatcaggcattacacgggtcctggggat
cagactgtcaatcctcaaaatggttttgtaagaaacagaattcctgaagagagagtgcag
gtattggcaagtagcagtcaatctggagactctgagagtgacagtgattcttacagctca
aggacttcttcccagagcaaaggaaataagtcctacttggaaggctcttctgatactcag
ccgaaagacgcggagtctactcgtgtggatggccatatctctttggagcagcctctgaat
ggaaacaacatccctaatccagtagagtatcaggaatcacctgaaatccagacaaaggca
aggcataaagagggggctacccagagagctaagcagagccggagaaaccctcccaggcgg
tcttcctatcgaatgcagacagaaccccaggaggacggttggtacgactgccacagggaa
acccatctgaatttttccgagacctaccaggactatgaggagtactggagagcttactac
agggcatggcaggaatactacgctgctgcttctcagtcatattattggaatgctcagagg
cacccaagttgggtggcagcttatcacatgaataccatttatctacaagaaatgatgcgt
ggcaaccagtga
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