Prionailurus viverrinus (fishing cat): 125173727
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Entry
125173727 CDS
T09889
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125173727 (CHD5)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125173727 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125173727
NCBI-ProteinID:
XP_047729182
LinkDB
All DBs
Position
C1:210551580..210622125
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AA seq
1947 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGLGGFDDCFPEEPVGLPKKKKSKKLKENRS
KGKRKKKEGSNDELTENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDED
DNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIRK
AKTKEGKGPGVRKKIKASKDSKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDF
DSASIHSSSVRSEGSAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDTC
PRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCRV
CKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPP
APFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRN
YQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHS
FDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVK
KGKKPKEDKQKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI
LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG
DKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWA
CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE
GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF
ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS
SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA
IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK
VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK
DDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAI
SKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEK
LLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDED
FEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMP
PQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT
RIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPAP
LGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTALDRVEGEDKHENSDGQERLEDTEK
APLSPEQPPKEEVLPEKEKILDKLELSLIHSRGDGNDFRPDDTKVEEKEPIETQQNGDKE
EDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAG
IVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLR
RAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEEL
LSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTTQQGAFGNSQMYNNNF
GPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtcttgggggcttcgatgactgcttccct
gaggagcctgtgggccttcccaagaagaagaaatccaagaagctcaaggagaacaggtcc
aaagggaaacggaagaagaaggaggggagcaatgacgagctgacggaaaatgaagaagat
ctggaagagaagtcggagagtgagggcagtgactactcccctaataagaagaagaaaaag
aaactcaaggacaagaaggagaaaaaagccaagcgaaagaggaaagatgatgacgaggat
gataacgatgatgggtgcctgaaggagcccaagtcctcggggcagctcatggccgagtgg
ggcctggacgatgtggagtacctgttctcagaggccgactaccacacactgaccaactac
aaggccttcagtcagttcctcaggccgctcattgccaagaagaacccgaagatccccatg
tccaaaatgatgaccgtcctgggtgccaagtggcgggaattcagcgccaacaaccctttc
aagggcagctcggcagcggctgccgcggcagcagtggccgcggccgtggagacagtcacc
atcgcccctccgctggctgtcagcccccagcaggcaccccagcctgtacctatccgcaag
gccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagcctccaaggac
tcgaagaaaaagggcaaagggagaaaggtagccgggctcaagttccgctttggagggatc
agcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcggacttc
gacagcgccagcatccacagctcctccgtgcgctccgagggctcggcagccctggggaag
aaaagcaagaggcggcgcaagaagaggaggattgacgatggtgatggctatgagacggac
caccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgc
ccgcgggcctaccacctagtctgcctcgacccagagctggagaaggctccggagggcaag
tggagctgtcctcactgtgaaaaggaggggatccagtgggagccgaaggacgacgaggac
gacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgcgtg
tgcaaagacggcggcgaactgctctgctgcgacgcctgcccgtcctcctaccacctgcat
tgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtact
tgtcccccactgaagggcaaagtccagcggatcctgcactggaggtggacggagcccccg
gctcccttcatggtggggctgccggggcccgacgtggagcccggtgtccccccaccgaag
cccctggagggcattccggagagggagttctttgtcaagtgggctggactctcctactgg
cactgctcctgggtgaaagagttacagctggagctgtaccacacggtgatgtatcgcaac
taccaaagaaagaacgacatggatgagccgccgccctttgactacggctctggcgacgag
gacggcaaaagcgagaagaggaagaacaaggaccccctctatgccaagatggaggagcgc
ttctaccgctacggcatcaagcccgagtggatgatgatccaccgtatcctgaaccacagc
ttcgacaagaagggggacgtgcactacctgatcaagtggaaagacctgccctatgaccag
tgcacctgggagatcgacgacatcgacatcccctattacgacaacctgaagcaggcctac
tggggtcacagggagctgatgctgggtgaggatgccaggctgcccaagaggctggtcaag
aagggcaagaagccaaaggaggataaacagaagccgccagacacacccatcgtggatccc
acggtcaagtttgacaagcagccttggtacattgactccacgggtggcacactgcacccg
taccagctggagggcctcaactggctgcgcttctcctgggcccagggcacggacaccatc
ctggccgacgagatgggcctgggcaagactgtgcagaccatcgtcttcctctactccctg
tacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccaccatcatc
aactgggagcgggagtttgagatgtgggcgcccgacttctacgtggtcacctacacgggg
gacaaggagagccgctccgtgatccgggagaacgagttttctttcgaggacaacgccatt
cggagcggaaagaaggtgttccgcatgaagaaagaagtgcagatcaaattccacgtcctg
ctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgagtgggcc
tgccttgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttcagggtc
ttgaacagctacaagatcgattacaagctgctgctgacggggaccccgcttcagaacaac
ctggaggagcttttccacctcctcaacttcctgactccagagaggttcaacaatctggag
ggcttcctggaggagtttgccgatatctccaaggaagaccagatcaaaaagctccatgac
ctgctggggccgcacatgctgaggcggctcaaggccgatgtgttcaagaacatgccggcc
aagaccgagctgatcgttcgcgtggagctgagccagatgcagaagaagtactacaagttc
atcctcacgcggaacttcgaggcactgaactccaaggggggagggaaccaggtgtcgctg
ctcaacatcatgatggacctgaagaagtgttgcaaccacccctacctcttccccgtggct
gccgtggaggcccccgtcttgcccaatggctcctatgacggcagctccctggtcaagtcc
tcgggcaagctcatgctgctacagaagatgctcaagaaactgagggatgaagggcaccgc
gtgctcattttctcccagatgacgaagatgttggaccttctggaggacttcctggagtat
gagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaagaggcg
atcgacagattcaacgcccccggggcccagcagttctgcttcctcctctcgacccgggcg
ggtggcctgggcatcaacctggctacagcagacacggtcatcatctacgactcagactgg
aatccgcacaatgacatccaggccttcagccgcgcccaccgcatcggacagaacaagaag
gtaatgatctaccgctttgtgactcgggcctcggtggaggagcgcatcacgcaggtggcc
aagcgcaagatgatgctcacccacctggtggtgcggcctggcctcggttccaagtctggc
tccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctcttcaag
gacgacgtggagggcatgatgtctcagggccagaggcctgtcacgcccatcccggatgtc
cagtcctctaaagggggagccctggctgccagcgccaagaaaaagcatggcagtaccccg
ccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcggccatc
tccaagctgctggacagaaaccaggacgccacggacgacacggagctgcagaacatgaac
gaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggatggcgtggag
gaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgactactgggagaag
ctgcttcggcaccactacgagcagcagcaggaggacctggcccgcaatctgggcaagggc
aagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggagtggcag
gacgagctctcggataaccagtctgaatattccatcggctccgaggacgaggacgaggac
tttgaggaaaggccagaagggcagagtggacggcgacaatccaggaggcagctgaaaagc
gacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgaggtgctg
ggcttcaatgcccggcagcggaaggcctttctgaacgccatcatgcgctggggcatgccc
ccccaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagcgagaag
gagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggctgacggt
gcagagaccttcgcggacggcgtgccccgtgagggcctctcgaggcagcacgtgcttacc
cgcatcggggtcatgtcactggttaggaagaaggttcaggagtttgaacacgttaacggg
aagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagcgaagtc
atctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccggcccca
ctgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaggagctgggg
gtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggacagagtg
gagggcgaggacaagcatgagaactcagatggccaggagcgactggaggacacagagaag
gccccgctgtccccagagcagccgccaaaagaagaagtgcttcctgagaaggagaaaatt
ctggacaagctggagctaagcttgattcacagcagaggggatggcaacgatttcaggcca
gatgacaccaaagtggaggagaaggagcccattgaaacacagcaaaatggtgacaaagag
gaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttcaacatt
gcagatgggggcttcacagagctgcacacgttgtggcagaatgaggaacgtgctgctgtg
tcctcggggaaaatctacgacatctggcaccggcgtcatgactactggctgctggcgggc
atcgtgacgcacggctacgcccgctggcaggacatccagaatgacccgaggtacatgatc
ctcaacgagcccttcaagtctgagatccacaagggcaactatctggagatgaagaacaag
ttcctggcccgcaggttcaagctgctggagcaggccctggtcatcgaggagcagctccgg
agggccgcgtaccttaacatgacccaggaccccaaccacccagccatggccctcaacgcc
cgcctggccgaggtggagtgccttgctgagagccaccagcacctgtccaaggagtccctt
gccgggaacaagccagccaatgctgtcctgcacaaggtcctgaaccagctggaggagctg
ctgagtgatatgaaggcggacgtgacgcgcctgccctccatgctgtcgcgcatccccccc
gtggctgcccgtctccagatgtcagagcgcagcatcctgagccgcctgaccaaccgagct
ggtgaccccaccactcaacagggcgctttcggcaactcccagatgtacaacaacaacttt
gggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatgcccctg
gggccctatgtgaccgatatctag
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