KEGG   Prionailurus viverrinus (fishing cat): 125174049
Entry
125174049         CDS       T09889                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03013  Nucleocytoplasmic transport
pviv05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125174049 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125174049 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pviv03019]
    125174049 (NDC1)
Messenger RNA biogenesis [BR:pviv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125174049 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 125174049
NCBI-ProteinID: XP_047729745
LinkDB
Position
C1:170956525..171003886
AA seq 677 aa
MRGMTCVGIGAGNGQEFHAGVVYLVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPI
QWLSDSFNDLYSSYVIFYLLLLSVVVVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQL
MHSFVHAAMGMMVAWCAAVITKGRYGFLVVSCTGTESLNSPAAQTCLNEYHLFFLLAGAF
MGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLG
HIPKAWISTAMDLQIDEQFHRPLDTLSGLLNLSLLYHVWLCGVFLLMTWYISWILFKIFA
TEAHLFPVQPPFSEESDECLPKVLNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQP
GGHPHNWTAISRECLSLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNFPEETTFQTP
RSSQMPRPSVPPLVKTSLFSSKLSTPDVASPLGTPFGSSVVNRMAGIFDVNTCYGSPQSS
QLIRRGPRLWTSDQQMPEFSNPSPSTCVGGEGKTARQPSMIYSWIQNKREQVKNFLSKRV
LIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLT
LQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQ
ASAEHQKRLQQFLEFKE
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgagagggatgacctgtgtgggaattggggcagggaatgggcaagagtttcatgcaggt
gtggtctacctggttttgggctggaggatagttgcgagtattgtctggtcagtgctgctt
ctacccatctgtaccacagtatttataatcttcagcagcattgatttatttcatcctatt
cagtggctgtctgattctttcaatgatctatatagttcctatgtaattttttacctcctg
ctgctgtcagtggtagtagtaataataagtatttttaacgtggagttctatgcagttgtg
ccttccattccctgctccagactggcactgattgggaagatcattcaccctcagcagctc
atgcactcatttgttcatgctgcaatggggatgatggtggcttggtgtgctgcagtgata
accaagggtcgatacggttttcttgtggtttcctgcactggtactgagagtttaaatagc
cctgctgcacaaacctgcctaaatgagtatcacctgttttttctcctggctggtgcattt
atgggctatagctacagtctcctgtattttattaacaacatgaactatcttccatttcct
atcatacagcaatacaagttcttgcgcttcaggagatctctgctcttgttagttaagcat
agttgtgtggaatcactgttcctgattagaaatttctgcattgtgtattattttcttggc
catattcccaaagcttggattagcactgcaatggaccttcagatagatgagcagtttcat
aggcctcttgacactctgagtggcctcttgaatctctcattactctaccatgtctggcta
tgtggtgtctttcttctgatgacttggtatatctcatggatactcttcaaaatctttgcc
acagaggctcatctgttccctgttcagccaccattttcagaagagtcggacgaatgcctc
ccgaaggtcttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctg
atgttgctttctcagtattctccctcacgaagacaagaagtttttagccttagccaacca
ggtggacatccccacaattggacagccatttcaagggagtgtttgagtcttttaaatgat
atgactcagaaactggttctgtatcaagaagcagctgctacgaatgggagaatggtgtcc
tcgtattctgtggagcctaagaaatcgaattttccagaagaaactacttttcagaccccg
agatctagccagatgcctcggccgtcagtgccaccattagttaagacgtcactgttttcc
tcaaaattgtctactcctgatgtggcaagtcccctcggaaccccatttggttctagtgta
gtgaatcggatggctggaatttttgatgtaaatacctgctatgggtcacctcagagttct
cagctgataagaagagggccaagattatggacttctgatcagcaaatgcctgaattttct
aatccttctccatctacctgtgttggtggggagggtaagacagcaagacagcctagcatg
atttattcatggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcatctattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcattcacc
gaagatagatttggagttgtccagactacactaccagctattcttaacactttgttgacg
ctgcaagaggcagttgacaagtacttcaagcttcctcatgcttccagtaaaccacctcgg
atttcaggaagccttgtggacacttcttataaaacactaagatttgcatttagagcatca
ttaaaaactgccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaa
gcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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