Prionailurus viverrinus (fishing cat): 125174049
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Entry
125174049 CDS
T09889
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03013
Nucleocytoplasmic transport
pviv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125174049 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125174049 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125174049 (NDC1)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125174049 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
125174049
NCBI-ProteinID:
XP_047729745
LinkDB
All DBs
Position
C1:170956525..171003886
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AA seq
677 aa
AA seq
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MRGMTCVGIGAGNGQEFHAGVVYLVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPI
QWLSDSFNDLYSSYVIFYLLLLSVVVVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQL
MHSFVHAAMGMMVAWCAAVITKGRYGFLVVSCTGTESLNSPAAQTCLNEYHLFFLLAGAF
MGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLG
HIPKAWISTAMDLQIDEQFHRPLDTLSGLLNLSLLYHVWLCGVFLLMTWYISWILFKIFA
TEAHLFPVQPPFSEESDECLPKVLNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQP
GGHPHNWTAISRECLSLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNFPEETTFQTP
RSSQMPRPSVPPLVKTSLFSSKLSTPDVASPLGTPFGSSVVNRMAGIFDVNTCYGSPQSS
QLIRRGPRLWTSDQQMPEFSNPSPSTCVGGEGKTARQPSMIYSWIQNKREQVKNFLSKRV
LIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLT
LQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQ
ASAEHQKRLQQFLEFKE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagagggatgacctgtgtgggaattggggcagggaatgggcaagagtttcatgcaggt
gtggtctacctggttttgggctggaggatagttgcgagtattgtctggtcagtgctgctt
ctacccatctgtaccacagtatttataatcttcagcagcattgatttatttcatcctatt
cagtggctgtctgattctttcaatgatctatatagttcctatgtaattttttacctcctg
ctgctgtcagtggtagtagtaataataagtatttttaacgtggagttctatgcagttgtg
ccttccattccctgctccagactggcactgattgggaagatcattcaccctcagcagctc
atgcactcatttgttcatgctgcaatggggatgatggtggcttggtgtgctgcagtgata
accaagggtcgatacggttttcttgtggtttcctgcactggtactgagagtttaaatagc
cctgctgcacaaacctgcctaaatgagtatcacctgttttttctcctggctggtgcattt
atgggctatagctacagtctcctgtattttattaacaacatgaactatcttccatttcct
atcatacagcaatacaagttcttgcgcttcaggagatctctgctcttgttagttaagcat
agttgtgtggaatcactgttcctgattagaaatttctgcattgtgtattattttcttggc
catattcccaaagcttggattagcactgcaatggaccttcagatagatgagcagtttcat
aggcctcttgacactctgagtggcctcttgaatctctcattactctaccatgtctggcta
tgtggtgtctttcttctgatgacttggtatatctcatggatactcttcaaaatctttgcc
acagaggctcatctgttccctgttcagccaccattttcagaagagtcggacgaatgcctc
ccgaaggtcttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctg
atgttgctttctcagtattctccctcacgaagacaagaagtttttagccttagccaacca
ggtggacatccccacaattggacagccatttcaagggagtgtttgagtcttttaaatgat
atgactcagaaactggttctgtatcaagaagcagctgctacgaatgggagaatggtgtcc
tcgtattctgtggagcctaagaaatcgaattttccagaagaaactacttttcagaccccg
agatctagccagatgcctcggccgtcagtgccaccattagttaagacgtcactgttttcc
tcaaaattgtctactcctgatgtggcaagtcccctcggaaccccatttggttctagtgta
gtgaatcggatggctggaatttttgatgtaaatacctgctatgggtcacctcagagttct
cagctgataagaagagggccaagattatggacttctgatcagcaaatgcctgaattttct
aatccttctccatctacctgtgttggtggggagggtaagacagcaagacagcctagcatg
atttattcatggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcatctattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcattcacc
gaagatagatttggagttgtccagactacactaccagctattcttaacactttgttgacg
ctgcaagaggcagttgacaagtacttcaagcttcctcatgcttccagtaaaccacctcgg
atttcaggaagccttgtggacacttcttataaaacactaagatttgcatttagagcatca
ttaaaaactgccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaa
gcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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