Prionailurus viverrinus (fishing cat): 125174281
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Entry
125174281 CDS
T09889
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125174281 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125174281 (SPATA13)
Membrane trafficking [BR:
pviv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125174281 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
DUF6377
Motif
Other DBs
NCBI-GeneID:
125174281
NCBI-ProteinID:
XP_047729865
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All DBs
Position
A1:complement(4488659..4838897)
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AA seq
1348 aa
AA seq
DB search
MGRCWAQPPYAGFGSAGLAERSPDVRGAGQKGPRARVPALLPDLSAVATTEEPDVHSRCE
SPAGSSLGDEGLRLGPVDTDVHVGLNPAALWPRARCPENMTTARNGHGRLAAIPCSVSDS
KDPKMVTYPACQNGGCGSNPCGDAEGAAEARLSPARLIRLFSVSRKRASANPERPRSMVL
MGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGSDAAKEDAPQRDPGKPIPNGAAAGT
HTGRCPSAGAASDPAAKAAPGAASDCSDPEEADDAFQRSTHRSRSIRRAYGLGRISFLDG
EKHQGSQNHVGPLAPVSQEPALCEILVKDSENNSIVYRKSKSTDNLNFLKKSSFKRKSTS
NLMDLKGAPEKPAPRRTLSSSSADSEKFGGAERRTKRWKSPLRARDFDRVLRFVSSAADA
AWRRESPRSGAPPPGEASQRLQVHSRLHDAYSRRVSTSAEREWRRCAGAGAHAAPGCGPA
GAGSPPVDAAACPLEAAGSRAAASAGPGAGSASASPAAEDPGGRQAGSRFTFEPEQPLTP
QRPTTPKPPSPQSPGAGNATCPSSLSALSLSSVDSEERAEGPASSQDSAQATCDKGSDDS
SVGSHPQLSPHLVSGPEERREEVVAEESWRRGSSRDEERTEAQRITRRKWGSGRRSRPRP
LSDYGQLANRSLSIPEDSIAVDPQKEDTVDGDQQPNTASMDPADQNPAVGCPKGGRRRRP
ISVIGGVSFYGNSQTEEIESLLTQPAARPPVPAHQVLPYKAVSARFRPFTFSQSTPIGLD
RVGRRRQMRASNVSSDGGTESSALVDDNGSEEDYSYEDICQANPRYLQPGGEQLAINELI
SDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGRSEDKEAWFPASFVRLR
VNQEELSENSSSTQGEEQEEDADKNRHRHLESKHQMRTNVIQEIMNTERVYIKHLKDICE
GYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQH
QEGFAIYSEYCNNHPGACAELSRLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKIC
KYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVGW
EGLDILERSSELIHSGELTQVSRHGKSQQRTFFLFDHQLVSCKKDLLRRDVLYYRGRTDM
DEVRLVDLEDGRDKDWNLSVKNAFKLVSKTTDEVHLFCAKKQEDKARWLQACGDERRRVR
EDREMGMEISENQKKLAMLNAQKAGHGKSKGYSACPVALPHQSLHPLHQRHVTVPTSVPQ
QQVFALAEPKRKPSLFWHTFNRLTPFKK
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctgttgggctcagccaccgtacgcaggcttcgggtccgcagggctggccgaa
cgcagtcctgacgtgcgcggggctggacagaaaggacccagagcccgagtcccagccctg
cttccggacctttctgccgtggccacaactgaggagcctgatgtgcacagcaggtgcgaa
agcccggccggcagcagcctgggagatgaaggtctgcgcctggggcctgtggacacagat
gtgcatgtgggtttgaaccccgctgccctgtggccacgggctcgctgccccgagaacatg
acaacagcccggaacggccatggccgactcgccgcgatcccctgttccgtctctgattcc
aaagaccccaaaatggtgacctacccagcgtgtcagaatggaggctgcggcagcaacccc
tgcggggatgcggaaggcgccgcggaggccagactcagccccgccaggctcatccgcctc
ttctccgtgagcaggaagagggccagcgccaacccggaaaggccccgctccatggtcctg
atgggaaattcctccacctggaacgcccttgcctccttccggaaaatggggtcttttaag
aaactgaagtcctccgtccttcagggaattcagaaccgagaggggtcagatgcggcaaag
gaagacgccccgcaacgcgacccggggaaacccatcccgaacggtgctgccgccggaacg
cacaccggcaggtgcccctccgcgggggcggcgagcgaccccgccgccaaggcggctccc
ggggccgcgtcggactgctccgaccccgaggaggccgacgacgccttccagaggagcacc
caccggtcccgcagcatccgccgcgcctacggcctgggccgcatcagcttcctggatggc
gagaagcatcaggggtcccagaaccacgtcgggcccctggcccccgtctcccaggagccc
gcgctgtgtgagatcctagtgaaagattccgagaacaacagcatcgtctaccggaaaagc
aagagcaccgacaacttgaactttctgaagaagagctccttcaaacggaagtccacctcg
aatctcatggacctcaagggggcgcccgaaaagcccgcgccccggaggacgctgagcagt
tcgtccgccgactcggagaagttcggtggggccgagaggaggacgaaacgctggaagagc
ccgctgcgggccagggacttcgacagagtcctgaggtttgtgagcagcgccgcggacgcg
gcctggcggagagagagcccccggagcggggcgcccccgccgggcgaggccagccagagg
ctgcaggtgcacagcaggctgcacgacgcctactcccgccgcgtgtccaccagcgccgag
cgcgagtggaggaggtgcgcaggcgcaggcgcgcacgccgccccgggctgtggcccggcg
ggggcggggagccccccggtggacgcggccgcgtgtcccctcgaagccgcaggctcccgg
gcggcggcgagcgcgggtcctggcgccggcagcgcctcggcgagtccggctgccgaggac
ccgggcggacgccaagctggcagccggtttaccttcgagccggagcagccgctcaccccc
caaaggccaaccacgcccaagccccccagccctcagagcccgggcgcaggaaacgccacg
tgtcccagcagtctcagcgcgctgtccctgagttcagtggacagtgaagagagggcagag
gggcccgcgtcctcccaggattcggcgcaagccacgtgtgacaagggcagtgacgacagc
agcgtcggcagccaccctcagctgagcccccacctggtgtcgggtcccgaagaaaggagg
gaggaggttgtggctgaggaatcctggaggcggggctcatcacgggatgaagagaggaca
gaggctcagaggatcaccaggaggaagtggggttctgggagaaggtcaaggccccgaccg
ctctccgactatggccagttggccaaccgaagtctctctattcctgaagactccattgct
gtggacccccagaaagaggacactgtggacggggaccagcagccaaacacggcctccatg
gaccctgcagaccagaaccctgccgtgggctgtcccaaaggcggccggagaagacgcccc
atctctgtgataggcggggtcagcttctatgggaacagccagacagaggaaatagagagt
cttctgacccaaccggcggccaggcctcccgtgccagctcaccaggtgctgccctacaag
gcggtttcggcccggttccggcccttcaccttctcccagagcacccccatcggactggac
cgcgtggggcgccggcggcagatgcgagcgtccaacgtctcttcagatggaggtaccgag
tcctctgccttagtggatgacaacggcagcgaggaggattacagctatgaagacatctgt
caggccaaccccagatacctccagccgggcggggaacagctggccatcaacgagctgatc
agcgatggcagtgtggtctgcgcagaggccctatgggaccacgtgaccatggacgaccag
gaactgggcttcaaggcaggagatgtcatccaggttctggaagcctctaacaaggactgg
tggtggggccggagtgaagacaaggaagcctggttccccgcaagctttgtcagattgcgt
gtcaatcaggaagagctgtcggagaattccagcagcacccagggtgaggagcaggaggag
gatgccgacaagaaccgccacagacacttggagagcaagcaccagatgaggaccaatgtc
atccaggagatcatgaacactgagcgggtgtacatcaagcacctcaaggacatctgtgag
ggctatatccgacagtgtcgcaaacacacgggaatgttcactgttgcgcaactagccacc
atttttggaaacattgaagatatttacaaattccaaagaaagttcctgaaagaccttgag
aaacagtacaataaagaggaacctcatttaagtgaaataggatcctgctttctgcaacac
caagagggctttgccatctactctgagtactgtaacaaccacccgggcgcctgcgcggag
ctgtcccgcctgatgaagcagggccgctaccgacacttcttcgaagcctgccgcctgctg
cagcagatgatcgacatcgccatcgacgggttcctgctgacgccggtgcagaagatctgc
aagtaccctctgcagctggccgagttgctcaagtacaccacgcaggagcacagtgattac
aacaatataaaggcagcctacgaagccatgaagaacgtagcctgtttgatcaacgagcgc
aagcgcaggctggaaagcatagacaagatagcacggtggcaggtgtccatcgtgggctgg
gaggggctggatatcctcgagcggagctcggaactgatccattccggggagctgacccag
gtcagcaggcacggcaagagccagcagcggacgttcttcctgtttgaccaccagctggtg
tcgtgcaagaaggacctgctgcgcagggacgtgctctactaccgaggccgcacggacatg
gacgaggtgcggcttgtggacctggaggacgggcgggacaaggactggaacctcagcgtg
aagaacgccttcaagctcgtcagcaaaaccaccgacgaggttcacctgttctgtgccaag
aagcaggaagacaaggcgaggtggctgcaggcctgcggtgacgagaggaggcgcgtgcgg
gaggaccgcgagatgggaatggaaatttcagaaaatcaaaagaaactcgccatgctaaat
gctcaaaaggcaggacacgggaagtcaaagggctacagcgcgtgcccggtggccctgccg
caccagagcttgcacccgcttcaccagcgccacgtgaccgtgcccaccagcgtcccccag
cagcaggtgtttgccctggcagaacccaagagaaagccctcgctcttctggcacacgttc
aacagactcacccctttcaagaagtga
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