Prionailurus viverrinus (fishing cat): 125174719
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Entry
125174719 CDS
T09889
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05200
Pathways in cancer
pviv05222
Small cell lung cancer
pviv05223
Non-small cell lung cancer
pviv05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125174719 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
125174719 (RARB)
05222 Small cell lung cancer
125174719 (RARB)
05223 Non-small cell lung cancer
125174719 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125174719 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pviv03310
]
125174719 (RARB)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125174719 (RARB)
Nuclear receptors [BR:
pviv03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
125174719 (RARB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125174719
NCBI-ProteinID:
XP_047730342
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Position
C2:complement(16757215..16931404)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNPAEHSPSISPSSVENSGVSQSPLVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgttctgtcagtgagtcctgggcaaatcctggatttctacact
gcgagtccgtcttcctgcatgctccaggagaaagctctcaaagcatgcttcagtggattg
acccaaaccgaatggcagcatcggcacactgctcaatcgattgaaacgcaaagcacgagc
tccgaggaactggtccccagccctccgtctccgcttcctccccctcgtgtgtacaaaccc
tgcttcgtctgccaggacaaatcatccgggtaccactatggggtcagcgcctgcgagggc
tgcaaggggtttttccgcagaagtattcagaagaacatgatttacacttgtcaccgagat
aagaactgtgttattaataaagtcaccaggaatcgatgccagtactgccgactccagaag
tgctttgaagtgggaatgtccaaagaatctgtcaggaatgataggaacaagaaaaagaag
gagccttcgaagcaggaatgcacggaaagctatgagatgacggctgagctggacgatctc
acagagaagatccggaaagctcaccaggaaaccttcccgtcactctgccagctgggtaaa
tacaccacgaactccagtgctgaccatcgagtccgactggacctgggcctctgggacaaa
ttcagtgaattggccaccaagtgcattattaagattgtggagtttgctaaacgtctgccc
ggcttcaccggcttgaccattgcagaccaaatcaccctgctgaaggccgcctgcctggac
attctgattcttagaatttgcaccaggtataccccagaacaagacaccatgactttttca
gatggccttaccctaaatcgaactcagatgcacaatgctggatttggtcctctgactgac
cttgtgttcacctttgccaaccagctcctgcctttggaaatggatgacacagaaacaggc
cttcttagtgccatctgcttaatctgtggagaccgccaggaccttgaggaaccaacaaaa
gtagataagctacaagaaccactgctggaagcactaaaaatttatatccgaaagagacga
cccagcaagcctcacatgtttccaaagatcttaatgaaaatcacagatctccgcagcatc
agtgctaaaggtgcagaacgtgtaattaccttgaaaatggaaattcctggatcaatgcca
cctctcattcaggaaatgctggagaattctgaaggacatgaacccttgacccccagttcg
agcgggaacccagcggagcacagtcccagcatctcacccagctcggtggaaaacagcggg
gtcagtcagtcaccactggtgcaataa
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