Prionailurus viverrinus (fishing cat): 125174769
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Entry
125174769 CDS
T09889
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125174769 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
125174769
NCBI-ProteinID:
XP_047730493
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Position
C2:complement(112152927..112306089)
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AA seq
744 aa
AA seq
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MAVPPGPLQLLGVLLTISLGSIRLIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLTMGKELPHMQYGKEYPHLPQYMKEIQPVPRMGKEAAPKKGKEIPLASLRGEQ
GPRGEPGPRGPPGPPGLPGHGIPGTKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKGE
IGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGPK
GEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQGP
IGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGIPGIGKPGFPGPKG
DRGIGGLPGALGPRGEKGPVGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVVG
PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGLKGLPGLPGAPGLLG
PKGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGMPGPKGEPGIPGPPGFPGVGKPGVAGL
HGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPHGEYLPDMGLGIDGVKPPHA
YGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGV
YYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
EQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccacctggccctctgcagctgctgggagtgctgcttaccatttccctgggc
tccatcaggctcattcaggctggtgcttactatgggatcaagccgctgccaccacaaatt
cctcctcagatcccaccacaaattccacaataccagcctctgggccagcaagtacctcac
atgcctttgggcaaagatggccttaccatgggcaaggagctgccccacatgcagtatggc
aaagaatatccacatctaccccaatatatgaaggaaattcagccagtgccaagaatgggc
aaggaagcagcacctaagaaaggcaaagaaataccattagcaagtttacgaggggagcaa
ggtccgcgtggagagcctggcccaagaggaccacctgggccccctggcttaccaggtcat
gggatacctggaaccaaaggaaagccagggccacaaggatatccaggaattggaaaacca
ggtatgcccggaatgccaggaaagccaggagccatgggaatgcccggagcgaaaggtgaa
attggacccaaaggggagatcgggccgatggggattccaggaccacaaggacctccaggg
ccccatggacttcctggcattggaaaaccaggtgggccagggttaccagggcaaccaggt
gcaaagggtgagcgaggacccaaaggaccaccaggacctccaggccttcagggtcctaaa
ggagagaagggcttcgggatgccaggtctgccaggcctgaagggtcctccagggatgcat
ggccctcctggccctgttggacttccaggagtcggcaaaccaggagttacaggcttccct
gggccccagggccccctgggaaagccaggtcctccaggcgaacctggtccacaaggccct
attggagtcccaggagttcaagggcctcctgggatgcctggagttgggaaaccaggccag
gatgggatccctggccagccaggatttccaggcgggaaaggggaacaaggactgccaggg
ctgccaggacccccaggcattccagggattgggaaacctggcttcccaggacccaaaggt
gacaggggcatagggggtctgcctggggctctgggaccaagaggggagaaaggaccagta
ggagccccaggaatggggggtcccccaggagagccaggcctgcctggaatcccaggtcct
atgggccctccaggtgctattggttttcccggacccaaaggagaaggtggggttgtaggg
ccacaggggccaccaggtcccaagggtgagccagggcttcaaggcttcccaggaaagcca
ggttttcttggtgaagtagggccccctggcatgaggggtttgccaggtcccatagggccc
aagggggaagctgggctcaaaggtttaccggggctccctggtgctcctgggctgcttgga
ccaaagggagagccaggaatcccaggggatcagggtttacagggtcctccaggcatccca
gggattgcgggccccagtgggcccattggaccacctggaatgccaggccccaaaggggaa
ccgggcatcccagggccccctgggttccctggagtagggaagcctggagtagcaggactt
catggccccccagggaagcctggtgcccttggtcctcaagggcagccgggccttccaggg
cccccaggccctccaggacccccaggtcccccagctgtgatgccccctacaccaccaccc
catggagagtatctgccagacatggggctgggaattgatggagtgaaacccccccatgcc
tatggggctaagaaaggcaagaatggagggccagcctacgagatgcctgcctttacagct
gagctgactgcacccttcccacctgtgggggctccggtgaagtttgacaaactgctctat
aacggcagacagaactacaacccacagacgggcatcttcacctgcgaggtccctggggtc
tactactttgcataccatgttcactgcaaggggggcaacgtgtgggttgctctgttcaag
aacaatgagcccatgatgtacacatatgatgagtacaaaaagggctttctggaccaggca
tctggaagtgcggtgctgctgctcaggcccggagaccgagtgttcctccagatgccctca
gaacaggccgcaggactgtatgctgggcagtacgtccattcctccttttcaggatattta
ttgtatcccatgtaa
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