Prionailurus viverrinus (fishing cat): 125174977
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Entry
125174977 CDS
T09889
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pviv04040
]
125174977 (SCN11A)
Ion channels [BR:
pviv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125174977 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
125174977
NCBI-ProteinID:
XP_047731112
LinkDB
All DBs
Position
C2:complement(6859991..6946665)
Genome browser
AA seq
1786 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTPAEPQPRPQLDLKV
SRKLPKLYGNIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSANRALFIFGPFNPI
RSLAIRISVHSLFSMFIICTVIINCVFMATACGKDNSNIYTDNAEYVFTGIYIFEALIKI
LARGFVLDEFSFLRDPWNWLDSIVITTAFVSYSPSIRASGISLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFKENLNQRCVRKDCKDMDNLD
DHCFEKKDSTEFRICGSWMGESACSEQFQCNHTKRNPDYNYTNFDNFGWSFLSMFRLITQ
DSWEKLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFLRDSGKDQ
PPESDSDEDSTKKPHILEQTKRLSQNLSVDFCDEHGDPFQRQRALSAVSILTITMQEQEK
SQEPCLPCGGNVASRYLVWNCSPQWLCVKKTLRVVMTDPFTELVITICIVINTVFLALEH
YKMDQSFEYMLYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
SVVVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNSIRNNTKACGPTVPCLRRWHMGDFYRSFLVVFRILCGEWIENMWECMQE
TSKPLCVVVFLLIMVIGKLVVLNLFIALLLNSFSNEEKDGSLDGEAKKTKVQLALDRFHR
AFCFVIHTLARFCHTWCRRQTLPQQKEVSGGPPAKSKDIIPLVAGVKRGSETWEEFGVVT
SAPKTLSVEHDRTWLAPLAEEEDDFESSGKINPQCVAPPEAGKQAYELPQETKTSTSPGA
QSVEIDVFSEGDIYLSAQNPRKKSDTTSVFSECSTIDPQDPFARVPEMVPKKEPERCFPK
GLGHCFPCCATDKRKSHWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLE
KRPNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLK
SLKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFS
GKFGRCINVSDTNSVINYSVVANQSQCESGNFSWVTPPVNFDNVGMAYLALLQVATFKGW
MDIMYAAVDSRGKELQPGFEENPQNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKIS
GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLAFDLVTNQVFDVIIIILIFLN
MVIMMAESNNHPEATKAILEELNLAFVVIFTIECLIKVFALRQYYFTNGWNLFDCVIVVL
SIVSAMVSALENQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRP
MLQSNDSCNPNLDSRHLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLMMDLPMVSGDR
LHCLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAV
IQKAFRKYKLKMSMCALEDGPRSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccagtgatctttccagatgaacgaaatttccgtccc
ttcacttcagacaccctggctacaattgagaagcggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacaccagcagaaccccagcctcggcctcagcttgacctaaaggtc
tccaggaagttgcccaaactctatggcaacattccccatgagctgatagcaaggcccctg
gaagacttggacccgttctacagaaatcataagacgtttatggtgttgaacaaaaagagg
accatctatcgcttcagtgccaatcgtgccttgttcatatttgggcctttcaatccaatc
cgaagtttagccattaggatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccaccgcctgtgggaaggacaacagcaacatatat
accgacaacgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttgttctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattacaacagcgtttgtatcatactcaccaagtatcagggccagtggc
atcagtctgtcgtccctacgtaccttccgggtgttcagagctttgaaagcgatttcggtg
gtttcaggtctgaaggtcatcgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttt
aaggaaaatctgaaccagagatgtgtcaggaaggactgtaaggatatggataaccttgac
gaccattgctttgaaaagaaagattccactgaattcagaatatgtggcagctggatgggt
gaaagtgcctgttctgaacaatttcagtgcaaccacaccaaaaggaatcctgactataat
tataccaattttgacaactttggctggtcttttctgtccatgtttcggctgataacccaa
gattcctgggagaagctttatcaacagaccttgcgtacctcagggcttttctcagtcttc
ttcttcgtggtggtcatcttcctgggctccttctacctgattaacttaaccctggctgtt
gtcaccatggcttacgaggagcagaacagaaacgtagctgccgagaccgaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggaaaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaggcatcatctttttccccaaagaagaga
aagctatttggtaataggaaacgaaagtccttttttttgagagactctgggaaagaccag
cctccagaatcagattctgatgaagattccacgaaaaagccacacatcctagagcaaacc
aaacggctgtcccagaatctgtcagtggatttctgtgatgagcacggggaccccttccaa
aggcagagggccctgagtgccgtcagcatcctcaccatcaccatgcaggagcaagaaaag
tcacaggagccttgcctcccatgtgggggaaacgtggcgtccagatacctcgtgtggaac
tgcagcccccagtggctgtgtgttaagaagaccctgcgagtcgtgatgaccgaccccttt
actgagctggtcatcaccatctgcatcgtaatcaacactgtcttcttggccttggagcat
tacaaaatggaccagagttttgagtatatgttgtatacggggaatttggttttcactggc
attttcatggcagaaatgtgcctaaaaatcatcgcgctcgatccctacaactacttccgc
cgaggctggaacatttttgacagcatcgtcgctcttctgagttttgcagatgtgatgaac
agtgtagttgtaggaaaacaaagtcctctgtttttccattccttaagagtgctaagggtt
ttcaagttagccaaatcctggccgactttaaacacactgataaagataattggtcactcc
gtcggagccctgggaaacctgaccgtggtcctggccattgtggtcttcattttctcagta
gttggcatgcagctttttggctctaaattcaattctataaggaataacaccaaagcctgt
ggccctacagtcccatgtttacgacgctggcacatgggggacttctaccgttcctttctg
gtggtattccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaa
actagtaaaccactgtgcgtcgtcgtctttctgttgatcatggtgataggaaaactcgtg
gtactcaacctcttcattgccttgctgctcaattccttcagtaatgaggagaaggatgga
agcttggatggagaggccaaaaaaaccaaagtccagttagccctggatcggttccaccgg
gctttttgctttgtaatccatactcttgcgcgtttttgtcacacgtggtgcaggaggcaa
acgttaccgcagcaaaaagaggtgtcgggaggccctcctgccaaaagcaaagacatcatt
ccactggtcgcaggggtgaaaaggggctcggagacctgggaggagttcggtgtagtcacg
tctgcaccaaagaccttgagtgtggagcatgaccggacttggttggccccacttgcagag
gaagaggatgattttgaatcttctggaaaaatcaatccacagtgcgttgcaccacctgag
gctggcaaacaggcctatgaactccctcaggagaccaagacgtctaccagcccaggagct
caaagtgtggaaattgatgtgttctctgaaggtgacatttatctgtcagcacagaacccc
cgaaagaagtctgataccaccagtgttttctcagaatgtagcaccattgatccacaggat
ccttttgcaagggtaccggaaatggttcccaaaaaagaaccagagagatgttttcccaaa
ggcctgggtcactgcttcccatgctgtgccacggacaagagaaagtcccactggatcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagcttt
gttatctttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgag
aaacgacccaatatccaagcattacttaattgtactgaccatattttcacatacattttt
atcctggagatgggtctaaaatgggtggcctttggatttgggaagtatttcaccagtgtc
tggtgctggcttgacttcatcattgtaattgtctctgtgaccagtctcatcgacctaaag
agcttgaagtccttcaggactctacgagcactgaggcccctgcgcgcactgtcccagttt
gaaggaatgaaggtggtcgtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttctct
ggaaaatttggaagatgcattaatgtatcagatacaaactcagttataaattacagcgtt
gtggcaaaccaaagtcaatgcgaaagtggaaatttctcttgggtcaccccgccggtcaac
tttgacaatgtaggaatggcctaccttgccctcttgcaagtggcaacatttaagggctgg
atggatatcatgtatgcagctgtcgactccagagggaaagaactacagccagggtttgag
gagaacccacaaaactaccttttcttcgtggcttttatcatctttggctcattctttact
ctgaatctcttcatcggtgttattattgacaacttcaaccaacagcagaaaaagataagt
ggtgaagatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaagcccattccgaggcctctgaataaatgccagggtctcgcg
ttcgacctggtcacaaaccaggtctttgacgtcatcatcatcatcctcattttcctcaac
atggttatcatgatggctgaatcaaataaccatcccgaagccacaaaagccatccttgag
gagctcaacctggcctttgtggtcatctttacaattgagtgtctcatcaaagtctttgct
ctgaggcaatactacttcaccaatggctggaacttattcgactgtgtgatcgtggttctc
tctattgttagtgccatggtttctgccttggagaaccagcagcacattcccttccctccg
acgctcttcagagttgtgcgcttggctcggattggtcggatcctgagacttgttcgggca
gcacgaggaattagaaccctcctttttgctctgatgatgtcccttccctctctattcaac
atcggtcttctgctttttctggttatgtttatctatgccatttttggtatgaactgcttt
tgcaaagtgaaggaagggtttggaattgatgacatattcaacttcaagacttttgttggc
agcatactctgtctcttccagatcaccacctcggcaggctgggatgccctcctcaggccc
atgctgcaatcaaatgattcatgcaaccccaacttagacagccgtcacctccctgccata
gccatagcctactttgttagttacatcatcatttccttcctcattgttgtcaacatgtac
attgctgtgatcttagagaacttcaatactgccactgaagaaagcgaggaccctttgggt
gaagatgactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacag
tttatcaagtatcctgccctttctgactttgccgatgcccttcctgagcctttacgggtg
gcaaagccaaacagatttcagttcctaatgatggacttgcccatggtgagtggagatcgc
ctccactgcctggatattctcttcgcgttcaccactagggtacttggtgactccagcggc
ctggacagcatgaaagcaatgatggaggagaagttcatggaggccaacccttccaagaag
ttgtatgaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgtt
attcaaaaggcctttcgaaaatacaagctgaagatgtccatgtgtgccttagaagacggg
cctcgctcaccactccagacactctgcaatggagacctctccagctccggggtggcggag
ggcaaggtccactacgactga
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