Prionailurus viverrinus (fishing cat): 125174979
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Entry
125174979 CDS
T09889
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125174979 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125174979 (VPS8)
Membrane trafficking [BR:
pviv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125174979 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
zf-RING_5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
125174979
NCBI-ProteinID:
XP_047731114
LinkDB
All DBs
Position
C2:76693090..76943014
Genome browser
AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTVDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGNTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVH
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVISPPLNAGRTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM
DRIEELVSLKPCKAAELVATHFSEQIEIVIKKLQNQVLLFKFLRSLLDPREGIHVNQESL
QMPPSVTEQFIELLCQFDPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDI
HGAFLIMLKRLQSKLQEITHQDEKANEDLSLKDVEDTMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSGSAAPHLHPEALRSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGRTRWTCYKCSSSNKVGKLSENS
SEIKKGKTAPSQVKMSPPCPPSKGDPAVKKAASEPVLDPQQIQAFDQLCRLYRGSSRLAL
LTELSQNRSSDSYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaccagaccatgaaaatgtggaacagagcctttgtgccaagactacagaa
gaagaactgaataagtctttcaatcttgaagcttcgctttcaaaattttcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggaatttgatattcct
caagttgatacgcctccaacactggaaagcatactcaatgagactgatgatgaagaggag
tcttttgttctggaggaccctacattgttaaacattgatactgttgattcccactcctat
gatacttcgtctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcgcagatagtgtctgcagctgacaaagttgatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttgatcag
aatcaagctttgcgactctgtctggggaacactagtgttggaggtcagtatggagccatc
tctgccctcagtatcaacaacgactgctcaagacttctctgtggctttgctaagggacag
atcacaatgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcct
ccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatttgcaat
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacgtgt
gaatctaggtgtctgttcagtggttccaagggtgaagtttgctgtattgagcctcttcat
tctaagcccgagttgaaagatcatcccatcacacagttttccttattggccatggcatcc
ttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgacttttccc
tatggacggatggatccttccagtgttccgttgctggcctggcactttgtggcagtacat
aattacgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctgttggtg
aagagagatgagtctggagcaatacatgttactaagcaaaagcatcttcacctctactat
gacctcatcaacttcacctggataaactcacgtacagttgtgctcttggacagcgtggag
aagttgcatgtgatcgatcggcagactcaagaggaattagaaacagtggagatctcagaa
gttcagttggtctataacagcagccatttcaaatccctagccaccggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttatcagtccatcagtagttacggtggt
cagatcttttacttggggacaaaatctgtttatgtgatgatgctgagaagctggagagag
agagtggatcatcttctgaaacaagattgtcttacagaagccttggctcttgcatggtct
ttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaagcgaaag
gctgttgttgcagatcggatggtagaaatcctattccactatgcagatcgagctctgaaa
aagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatggtgcct
gtcatagttgattactgcctgctgctagagcgaaaggatcttttatttagccagatgtat
gacaaattaagtgagaattcagtggctaaaggagtgtttttggagtgccttgaaccatat
attttaagtgataaattggtggggatgaccccccaggtaatgaaagacttgattgttcat
ttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggatatcacc
agcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgatgctatg
atctatgtttacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcatttctcctcctctgaatgcaggaagaacactaacagatgagcaagttgttatgggc
aacaagctgcttgtatatattagctgttgtctagcaggccgagcctatccccttggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgattcgcctg
cattcagcagaagcctcccctgaggaagaaatctacccctatgttcggactttgctacat
tttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaaaatgac
aagcaagctgtagaatatcaacaacgaattgtggacattttgttgaaagttatggtggag
aattcagattttactccttcacaagtagggtgtctctttacgttccttgcccggcagcta
gcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtccttgaattc
ctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtccttttagaattg
ctgcaggctggaggcatagttcagtttgaagagagtcggctcatccgtatggcagaaaaa
gcagagttctatcaaatttgtgagtttatgtatgaacgagaacaccagtacgacaaaatt
attgattgttacttacgtgatccactgagggaggaagaagtctttaactacattcacaat
atcttatccattcctggacacagtgcagaggaaaagcagtctgtatggcagaaagcaatg
gatcgtattgaggaacttgtatccctgaagccctgtaaagctgcagagctggttgctact
cacttttctgaacagattgaaatagtcattaaaaaacttcagaaccaggttttgcttttc
aagtttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaggaatcgctg
cagatgcctccctctgttacggagcagttcattgagctgttgtgtcagttcgacccaaac
caggttatagagacgctgcaggtccttgagtgctaccgcctggaggaaaccatccagatt
acccagaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaaggagatatt
catggggccttcttaataatgctaaagagactacaaagcaaacttcaggagataacacat
caagatgaaaaggccaacgaggacctttcattgaaggatgttgaagataccatggtagag
acaattgccctttgccagaggaattcacataatttgaaccagcagcaaagagaggcactc
tggtttccattattggaggcaatgatggcccctcagaagctgtctggttcagctgcacct
catctacaccctgaagctctgagatctctgaccatgcaagttctaaacagcatggcagct
tttattgcccttccatccatcttgcaaagaatcttacaggatccagtttacggaaaagga
aaacttggagaaatccagggactcattctgggaatgttggatacctttaactatgaacaa
actctgctggaaacaactactagccttctaaaccaagatctccattggtcattgtgtaac
ctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctatatgtttg
cagcagtacaagagacgccaagaaatggcggatgaaatcattgtctttagctgtggccat
ttgtatcactcattctgtctgcaaaacaaagagtgcaccatagaaactgaggggcggaca
agatggacatgctacaaatgcagctcaagtaacaaagtagggaaattaagtgaaaattca
tctgaaattaaaaaggggaagacagccccgtcacaggtaaaaatgtctcctccttgtcct
ccatccaaaggggatcctgctgttaagaaggcagcctcagaacctgttctggacccacag
caaatccaagcgtttgatcaactttgccgtctctaccgaggaagttcccggctggccctc
cttacagaactctcccagaatcgcagcagcgacagctacaggccgttcagtggctcccag
agtggccctgctttcaacagcatcttccagaatgagaacttccagctgcagctcattccc
ccacctgtgactgaggactga
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