Prionailurus viverrinus (fishing cat): 125175030
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Entry
125175030 CDS
T09889
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04360
Axon guidance
pviv04724
Glutamatergic synapse
pviv04726
Serotonergic synapse
pviv04929
GnRH secretion
pviv04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125175030 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
125175030 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
125175030 (TRPC1)
04726 Serotonergic synapse
125175030 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
125175030 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pviv04040
]
125175030 (TRPC1)
Ion channels [BR:
pviv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125175030 (TRPC1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
125175030
NCBI-ProteinID:
XP_047731253
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All DBs
Position
C2:37872192..37938611
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AA seq
752 aa
AA seq
DB search
MKKRIHPPALGDYREACDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQ
LLLDYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVA
PVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLA
SPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRE
LEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSG
YRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGKIIHTPFMKFIIHGASYFTFLLLL
NLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFV
MNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSS
ILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSN
DTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLL
VAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKW
ICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENL
NELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaatccatccaccagcactgggagactacagagaagcttgtgactattat
atggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagat
gtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatatactacag
cttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaa
gtagtgggagctgttgatatactacttaatcatcggccaaaacgatcatcaagaccaact
atagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggatgttgca
cctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgttaaaacag
gatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgctctgcaaaa
aacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgtttggcc
agtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaacttagt
gctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgaggaatta
gcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgagaa
ttggaagttatcctaaaccatacatctagtgatgaacctcttgacaaacggggattacta
gaagaaagaatgaacttaagtcgtctaaaacttgctatcaaatataaccaaaaggagttt
gtctcccagtctaactgccagcagttcctgaacactgtttggtttggacagatgtcaggc
taccgacgtaagcccacctgtaagaagataatgactgttttgacagttggtatcttttgg
ccagttttgtcactttgttatttgatagctcccaaatctcagtttggcaaaatcattcac
actccttttatgaaatttattattcatggagcatcgtatttcacattcctgctgttacta
aacctatattctcttgtctacaatgaggataagaaaaacacaatggggccagcccttgaa
agaatagactatcttcttatactgtggattattgggatgatttggtcagacattaaaaga
ctctggtatgaagggttggaagactttttagaagaatcccgtaatcaactcagttttgtc
atgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaagtttcat
gattttgctgatcggaaggactgggatgcattccatcctactctggtggcagaagggctt
tttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaacaagctcc
atattgggtccattacagatttcaatgggacagatgttacaagattttggaaaatttctt
gggatgttccttcttgttttgttttctttcacaattggactgacacaactgtatgataaa
ggctataccccaaaagaacagaaggactgtgtgggcatcttctgtgaacagcaaagtaat
gataccttccattcgttcattggcacttgctttgctttgttctggtatattttctcctta
gcacatgtggcaatctttgtcacaagatttagttatggagaagaattgcagtcctttgtt
ggagctgttattgttgggacatacaatgtcgtggttgtgattgtgcttaccaagctgctg
gtggcaatgcttcataaaagctttcagttgatagcaaatcatgaagacaaggaatggaag
tttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacattacccccacct
ttcaatattattccttcaccaaagactatttgctatatgattagtagcctcagtaagtgg
atttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttaaaggaatggaga
aatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgcctagtgcatcgt
tacttgacatccatgagacaaaagatgcaaagtacagatcaggcaaccgtggaaaatcta
aatgaactacgccaagatctttcaaaattccgaaatgaaataagggatttacttggcttt
cggacttctaaatatgctatgttttacccaagaaattaa
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