Prionailurus viverrinus (fishing cat): 125175083
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Entry
125175083 CDS
T09889
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125175083 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125175083 (CNOT10)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125175083 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_19
ARM_TT21
TPR_12
TPR_8
TPR_MalT
TPR_7
DUF6058
Motif
Other DBs
NCBI-GeneID:
125175083
NCBI-ProteinID:
XP_047731317
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Position
C2:complement(2401714..2472435)
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AA seq
803 aa
AA seq
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MKPVGLKGVRVCVPKSPVRLEAQPCSLGQSRRKVRFKDEGPFSLTIGNGDYFWTNKDMLW
NYVQTLSDQGAEKHEGTRQSSGITDQEKELSTSAFQAFTAGNYDACLQHLACLQEVNKDD
YKIILNTAVAEFFKSNQMTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVFL
YHLRQYSEAIAVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTAEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSNQLGGNTESSESGETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVTSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPVQPIQMPAFTAHRK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgttggcttaaagggtgtccgggtttgtgtgcctaagagccctgtacgccta
gaagctcagccatgttcgttaggccagagtcgaaggaaagtcaggtttaaggatgaaggg
ccattttctcttacaatcggcaacggagactacttttggacaaataaagacatgttgtgg
aattatgtgcagactctttctgatcagggagcagagaaacatgaagggacgcgtcagtcc
tctgggatcaccgatcaagagaaggagttgtccaccagtgctttccaggctttcacagct
ggaaattatgatgcctgtctgcaacaccttgcctgcctacaagaagtgaacaaagatgat
tataaaataattttgaatacagcagtggctgagttttttaaaagtaaccaaatgacaaca
gacagtttgagacaaacacttaaccaactgaagaatcaggtccactcagctgtcgaagaa
atggatggcttagacgacgtggagaacagcatgttgtattacaatcaggcagtctttctg
tatcatctgcggcagtactcagaggccatagcagttggtgaaaagctctaccagttcata
gaaccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctatatata
ttaacctatcaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
cagggtaacaataacaaaaatgggaagaatgagactggtaacaacaccaacaaagacgga
tctaatcacaaagctgaaagtggagccctaatagaagctgcaaaatcaaagatacatcag
tataaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggaaatcaag
tcggtcatgaacacagctggaaattctgccccctctctgtttcttaaaagcaattttgag
tacttaagaggcaattatcgaaaagctgtgaagctgttaaatagttcaaacattgctgag
catccaggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataatcttggt
tgtatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggccctc
caggagaacgacaatgtttgtgcacagctcagtgcaggcagcactgatccaggcaaaaag
ttttcaggaagacccatgtgtacattactaaccaacaagaggtacgagttgctgtataac
tgtggaattcagcttcttcacattggaagacctcttgccgcctttgagtgtctgattgaa
gctgttcaggtttatcacgcaaatccccgcctctggctacggctggccgaatgctgcatt
gctgccaacaaggggactgctgaacaagaaactaaaggccttccaagtaagaaaggaatt
gtacagtctattgttggtcaaggctatcatcgcaaaatagttctggcatcacagtccata
cagaatactgtatataacgatggacagtcttcagccattcctgtagccagcatggagttt
gcagccatctgtctccgaaacgccttgctgctcttaccggaagaacagcaagatccgaag
caggaaaatgggtctaaaaatagtaaccaattaggtgggaacacggagagcagcgaaagc
ggcgaaacttgcagcagtaaaagccatgatggagataagttcattccagctccaccttcc
tctccattgagaaaacaggaattagaaaacttaaaatgctccatacttgcctgcagtgct
tacgtggctctggctttaggtgataaccttatggctttgaatcacgcagataaacttctt
cagcagcccaagctgtcaggatcccttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacaggatatctgatgccattactcacttgaaccccgagaatgtcact
gatgtttccttgggcatctcttcaaatgaacaggaccaaggatcggacaaaggtgaaaat
gaagcaatggaatcctctgggaagcgggccccccagtgctaccccagttccgtcacctct
gccaggaccgtgatgctgttcaatctcggcagcgcctactgtctgcggagcgaatacgac
aaggctcgaaagtgtctgcaccaggcggcttcgatgatccaccctaaggaggtgccccct
gaagccatcttactggcagtctacctggagctgcaaaatggtaacacccagctggcctta
cagatcatcaaaaggaatcagctgcttcctgcggtgaaaacactgtctgagatgagaaag
aagccagtgttccagcctgtccacccggtccagcccatccaaatgccggctttcactgca
cacagaaagtga
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