Prionailurus viverrinus (fishing cat): 125175099
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Entry
125175099 CDS
T09889
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03030
DNA replication
pviv03410
Base excision repair
pviv03420
Nucleotide excision repair
pviv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125175099 (RFC4)
03410 Base excision repair
125175099 (RFC4)
03420 Nucleotide excision repair
125175099 (RFC4)
03430 Mismatch repair
125175099 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pviv03032
]
125175099 (RFC4)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125175099 (RFC4)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125175099 (RFC4)
DNA replication proteins [BR:
pviv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125175099 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
125175099 (RFC4)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125175099 (RFC4)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125175099 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
125175099 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
DUF815
AAA_16
AAA_30
AAA_22
AAA_11
AAA_24
AAA_5
Mg_chelatase
RuvB_N
AAA_28
SLFN-g3_helicase
AAA_19
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
125175099
NCBI-ProteinID:
XP_047731336
LinkDB
All DBs
Position
C2:complement(78462124..78479260)
Genome browser
AA seq
389 aa
AA seq
DB search
MVPLVLSTIHLEDARSRGDVLYLGEVTMQAFLKGTSVSTKPPLKDRVAATAGSSGENKKA
KPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAREL
FGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSM
TSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIA
DKEHVKISNEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAETID
GLFAACQSGSFDKLEGVVKNLIDEGHAATQLVSQLHDVVVENDNLSDKQKSIITEKLAEV
DKCLADGADEHLQLISLCATVMQQLTQNC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtccctttagttctcagcacaatacatttagaggatgctaggtcacgaggtgatgtc
ctttatttgggtgaagtaaccatgcaggcttttctaaaaggcacatctgtcagtactaaa
ccaccactgaaggatcgagtagctgccacagctggaagcagtggagagaacaagaaagcc
aaacctgttccgtgggtggaaaaatatcgcccaaaatgtgtggatgaagtcgctttccag
gaagaagtggttgcagtactgaaaaagtctttagaaggagctgatctccctaatctcttg
ttttatgggccacctggaactggaaaaacatccactattctggcagcagctagagagctt
tttgggcctgagttgtttcgattgagagttcttgaattaaatgcatctgatgaacgtgga
atacaggttgttagagaaaaagtgaagaattttgctcaattaactgtgtcaggaagtcgt
tcagatgggaagccatgtccaccttttaagattgtgattctggatgaagcagattctatg
acctcggctgctcaggcagctttacgacgtactatggagaaggagtctaaaaccacccga
ttctgtctcatctgtaattatgtcagtcgaataattgaacctctgacctctagatgttct
aaattccgcttcaaaccactgtcagataaaattcaacagcagcgattactagacattgct
gataaagaacatgtcaaaattagcaatgagggaatagcttatcttgttaaagtgtcagaa
ggagacttaagaaaagctattacatttcttcaaagtgctactcgattaacaggtggaaag
gagatcacagagaaggtgatcacagacattgctggggtaataccagctgagaccatcgat
ggactatttgctgcatgtcagagtggctcttttgacaaactagaaggtgtggtaaaaaat
ttaatagatgagggccatgcagccactcagcttgtgagtcaacttcatgatgtggttgta
gaaaacgataacctttccgacaaacagaaatctatcatcacagaaaaacttgctgaagta
gacaagtgcttagcggatggtgctgatgaacatctacaactgatcagcctctgtgctact
gtgatgcagcagttaactcagaattgctga
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integrated database retrieval system
