Prionailurus viverrinus (fishing cat): 125175579
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Entry
125175579 CDS
T09889
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pviv04515
]
125175579 (PCDHB1)
Cell adhesion molecules [BR:
pviv04515
]
Cadherins
Protocadherins
125175579 (PCDHB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125175579
NCBI-ProteinID:
XP_047732224
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Position
A1:117620972..117623428
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AA seq
818 aa
AA seq
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MAVAHRKLMQNRQVGSLLFFVCISVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKVHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNKYFHL
HTRFRSHGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAHIRVVVLDVNDHVP
QFSRLVYRAQVLENSANGSLVVTVSATDLDEGSNKDITYSLAQNPEAILQTFQIDSQTGD
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLETVVALFSIRDRDIRVGGKIICFLREDLPFAVKPTFRNSYSLVTDRVLDREEVSGYNI
TVVAMDTGPPSLFTETVIEVLISDINDNPPIFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPESGDLSVFAYISINSDNGKLYALRTMDYEAIQKFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDTGLFSVQQQNGEIRTLRQIAERDPVVQKLTILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFRDPSKHPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVIHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQEGANGSLSQPCPYEMCSATGTGNSEFRFLKRFMPNFPF
PHGTGEAKTEAGSSLPPDSGRNRSRGSEGHGQVPDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcacagaaagctcatgcagaacaggcaagtagggtctcttctctttttt
gtgtgcatatctgtgggaagtgcagcaaccatccgctactccgtggcagaagagatggag
agcggttcgtttgtggctaatgtggctaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcggctggtttccgagggcaacaaagtgcacttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcactctgtggcaaagctgac
ccgtgtgttctgcattttgaaatagtcttggtggagccactgcagtcctttcgtgtcgag
gtcagggtatttgatatcaatgacaatgccccgattttcctaaacaaggagccgctttta
aagattccggagagtacccccttgggttcacgttttcctctgcagagtgcccaggatctg
gacgtgggcctcaatggtctccaaaactacaccttaagccccaacaagtatttccacctg
catacccgctttcgcagccatgggcccaaatacgctgagctggtgctggataagcccctg
gacagagaggagcagcctgaagtcaacttgacaattacagcggtggatggtgggtcccct
cccaaatctggcatcgctcacatccgtgtggtcgttctggacgtcaatgaccacgtgcct
cagttctccagattggtgtaccgcgctcaggtactagaaaatagtgccaatggttctttg
gtggttactgtgagtgccacagacctggatgagggctccaacaaggatataacttattcc
ttagctcaaaacccagaagcaattctccagacgtttcagattgactcacagactggggat
gttcgactaagagggcccctagattttgaagcaattgaaacatatgatattgacattcaa
gccaccgatggagggggcctctctgcccacagcaaagtcctggtggaagtggtggatgtt
aatgacaatcctcctgaagtgacagtctcctctgtgtccagccctctccctgaggactcc
ccattagagactgtagtggcccttttctctatccgagaccgggacattcgagtgggagga
aaaatcatctgcttcctcagagaagaccttccctttgcagtcaaacctactttccggaat
tcttactctctggttactgacagagtcttggatcgggaagaggtctcaggctacaatatc
accgttgttgccatggatactgggccacccagtctgttcacagaaactgtgattgaggtg
ctaatatctgacattaatgacaatcccccaatatttcaggaagactcatacattttgact
gttcgagaaaacaacagccctgcaatttttattggcaaagttcatgctgaggatctagat
ttgggtgagaatgcccaagtaacatatactctgcttcctccagaaagtggagatttatca
gtctttgcttacatctccataaattcagacaatgggaagctctatgcactgagaaccatg
gactatgaggccattcaaaaatttcagtttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaggttactgtcagagtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcaccttgccctgcaatgacctagtgcccaggtct
gcagaggcaggctacctggtgaccaaggtagtggctgtggacggtgactcaggtcagaat
tcttggctttcatatcatctccttaaggccactgacactgggttattctctgttcaacaa
caaaatggggaaatccgtacacttcggcagatagctgaaagagaccccgtggttcagaaa
cttacaattcttgttcaggatcatggccaaccagctctttccactactgcctcactcaac
attttgctggtagatgggttttctgagccctatctacagtttcgggatccatccaagcat
cctacaagggtaaatccatccactaaatatttggtcatttctctggctgtgctttccttt
ctctttctcctttctgtcacagtgatctttgttatacacatctaccagaaggttaaatat
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaacaacttg
gtacaagaaggagccaatggatctttatctcagccatgtccctatgaaatgtgctcggcc
actggcactggcaatagtgagtttcggttccttaagcgctttatgcccaacttccccttc
ccacatggcactggagaagcaaaaacagaggctggctccagtttacccccagattctggt
aggaataggtctcgggggtcagagggccatggccaagtacctgatgactatatgtag
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