Prionailurus viverrinus (fishing cat): 125175641
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Entry
125175641 CDS
T09889
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05016
Huntington disease
pviv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
125175641 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
125175641 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pviv03037
]
125175641 (IFT57)
Cilium and associated proteins [BR:
pviv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
125175641 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
DUF745
SpecificRecomb
Motif
Other DBs
NCBI-GeneID:
125175641
NCBI-ProteinID:
XP_047732346
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Position
C2:104556851..104610732
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AA seq
429 aa
AA seq
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MAAATAVVTPSGLEDGVSRSRGEGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLHYEEEL
LRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGFGEHICYVLDCLAEEALKYIGFTWKRPTYPVEELEEEAVPE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATV
IPESAVGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgacggcagtggtcacgccctcaggtttggaggatggggtgtctcggtcc
cgcggcgaaggggccggggaggtggtcgtggagcgggggcctggtgcggcctaccacatg
ttcgtggtgatggaggacctggtggagaagctgaagctactccactacgaggaggaactc
ctccggaagaacaacctgaagcccccgtccagacactattttgcactgcctaccaaccct
ggtgaacagttctacatgttttgcactcttgctgcttggttgattaacaaagcaggacgc
ccctttgagcaacctcaagaatacgatgaccctaatgcaactatatctaacatattatct
gaacttcgatcatttggtagaactgcagattttcctccttcaaaattaaagtcaggattt
ggagaacatatatgctatgttcttgactgtctagctgaagaagcattaaaatatattggt
ttcacctggaaaagaccaacatacccagtggaagaattagaagaagaagctgtcccagaa
gatgatgcagaattaacattaaataaagtggatgaagaatttgtggaagaggagacagac
aatgaagaaaactttattgatctcaacgttttgaaggcccagacatatcgcttggatatg
aacgagtctgccaaacaagaagatattttggaatccacaacagatgctgcggaatggagt
ctcgaagtggaacgtgtactaccacaactgaaagtcacgattaggactgacaataaggat
tggagaattcatgttgaccaaatgcaccaacataaaagtggaattgaatctgctctaaag
gagaccaagggatttttggataaacttcataatgaaattagcaggactctggaaaagatc
ggcagccgagaaaagtacatcaacaatcagcttgagcacttggttcaagaatatcgtgca
gctcaagcccaactgagtgaggcaagggagcgataccagcagggtaatggcggagtaacg
gagaggaccaggctcctgtctgaggttacagaagaactagaaaaggtaaagcaggaaatg
gaagaaaaaggcagcagtatgactgacggcgctcccttggtgaagattaaacagagttta
acaaagctgaagcaagaaactgttcagatggacatcagaatcggtgttgtagaacacaca
ttactccaatcaaaactgaaagagaaatctaacatgactagggacatgcatgcgacagtc
attccagaatctgcagtaggctcttattaa
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