Prionailurus viverrinus (fishing cat): 125176007
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Entry
125176007 CDS
T09889
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03022
Basal transcription factors
pviv03420
Nucleotide excision repair
pviv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125176007 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
125176007 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125176007 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125176007 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125176007 (GTF2H1)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125176007 (GTF2H1)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125176007 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
125176007
NCBI-ProteinID:
XP_047732670
LinkDB
All DBs
Position
D1:74505879..74543740
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNINATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITTLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHKWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctaattgtaaagaaggtgcgtcaaaagaagcaa
gatggagctttatacctcatggcagaaaggattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaattagtccagaaggaaaa
gctaaaattcaacttcagctggtgttgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagctgtgaaagagcgagatgcagtgaaagaccttcttcagcagctgctg
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtgatcagtgctgag
gaattctgggccaatcgtttaaatataaatgcgacagagagttcttctacatccaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgagatacaatttaacctctgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggaattt
tggacacgtttttttcagtcccattattttcacagggaccggctgaatacagggtcaaaa
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaaccatggtttcacta
ggagtaaaaaacccactgcttgacttgacagctttggaagataaaccattagatgagggc
tatggcatttcttctgtgccatctgcttctaattctaaatccataaaggagaatagtaat
gctgccatcatcaagaggtttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgagcccagcagcattgatggaaattctgga
gatgcagattgcttccaaccagcagtcaaaagggcgaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcactacagtatgcaacaagtcaggacatt
attaattcttttcaaagtattaggcaagaaatggaagcttatacacccaaattaactcag
gttctctcaagtagtgctgccagcagtactatcacaacactgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgag
ttgaaacacctgtatgtggctgttggggaacttctacggcacttctggtcctgctttccc
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattt
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaac
ttggtaagtcacatagaggagatgctccagacagcctacaacaagctccacaagtggcag
tcacggcgtctgatgaagaaaacgtga
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