Prionailurus viverrinus (fishing cat): 125176109
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Entry
125176109 CDS
T09889
Name
(RefSeq) tripartite motif-containing protein 34-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125176109
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125176109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
RE_Alw26IDE
SF-assemblin
Bacillus_HBL
TRAF3_RING
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
125176109
NCBI-ProteinID:
XP_047732959
LinkDB
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Position
D1:62411532..62431878
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AA seq
487 aa
AA seq
DB search
MALKILNIQDEVFCPICLELLTESLSLDCGHSFCQACITANTKEAEIRLEGENSCPVCGV
RYSLENLWPNQHLANIVEKIRKVQLSPEEELKRDLCVRHKEKLLLFCKEDRKIICWLCER
SQEHHGHHTFLVEEVVKECQEKLQAALERLKTEQQKVEKLEADIREERTSWKYQIQTERQ
RIRTEFNQLRSILDSEEQRELQKLEEEEKRILDNLAEAEDDLAQQNQLVKELISDLEHRS
AWPTVDLLQDMSGIMKWSEIWTLRKPKTVSRRLKSSFHAPDLRAMLRIHRELTHVQCYWV
DITLNPINLNLNLVLSEDQRQVMPMPIWPVKSYNYGILGSQNFSSGKHYWEIDVSKKTAW
ILGVYCRTCFRNIKYAVRQGTDYQNVFSRYKPQFGYWVIGLQNKFEYKAFEESYTSDPKV
LTLSMAVPPCHVGVFLDYEAGIVSFFNVTNHGSLIYKFSKCCFSQTAYPYFNPLNCPGPI
TLCPPSS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaaatcctgaacatacaagacgaggtgttctgtcccatctgcctggagctt
ttgacagaatccctgagcctagactgtggccacagcttctgtcaagcttgcatcactgca
aacaccaaggaggcagagatcagactagaaggggaaaacagctgtcctgtatgtggtgtc
agatactcccttgaaaacctatggcctaatcagcatctggctaacatagtggagaaaatc
agaaaggtccagttgagcccagaggaggagctgaagagagacctctgtgtgcgccataaa
gagaaactcctgctcttctgtaaggaagataggaagatcatttgttggctttgcgagcgg
tctcaggagcaccatggtcaccacacattcctcgtggaggaagtagtcaaggaatgtcag
gagaagctccaggctgctctggagaggttgaagacagagcagcagaaagttgagaagcta
gaagctgacatccgagaagagagaacttcctggaagtaccagatacagactgagagacaa
aggataagaacagaatttaatcagcttagaagcatcctggacagtgaagagcagagagaa
ctgcaaaaattggaagaagaggagaagagaatactggataacttggctgaggctgaggat
gatctggctcagcagaaccaactggtgaaagaacttatctcagatctggagcatcgcagt
gcatggccaacagtggacctgctgcaggacatgagtggaatcatgaaatggagtgagatc
tggacactaaggaagccaaaaactgtttcaagaagactgaagagttccttccatgctcca
gatctgagggcaatgctgcgcatacatagagagctaacacatgtccagtgctactgggtg
gacatcacactgaatccaatcaacctaaatttaaaccttgtcctttcagaagatcagaga
caagtaatgcctatgccaatttggcctgttaaatcttataattatggtatcttgggctcc
caaaacttctcttcagggaaacattactgggaaatagatgtgtccaagaagactgcttgg
atcctaggagtatactgtagaacatgtttccgtaatataaaatatgctgttagacaaggt
acagattatcaaaatgtcttctccagatacaaacctcaatttggctactgggttattggg
ttacagaataaatttgagtataaagcctttgaggagtcttacacatctgatcccaaggtc
ttgactctttccatggctgttcctccctgtcatgttggggttttcctagactatgaagca
ggcattgtctcatttttcaatgtcacaaaccatggatcactcatctacaaattttctaaa
tgttgcttttctcagactgcttatccatattttaatcctttgaactgtccaggccccatc
accctgtgcccaccgagctcctga
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