Prionailurus viverrinus (fishing cat): 125176117
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Entry
125176117 CDS
T09889
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125176117 (SOX6)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125176117 (SOX6)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125176117
NCBI-ProteinID:
XP_047732986
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All DBs
Position
D1:complement(72427713..73041728)
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AA seq
883 aa
AA seq
DB search
MPSSSEVLADVVRESRIEEWKSSHFIRMSSKQATSPFACAADGEEAMTQDLTSREKEEGG
DQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDTVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFISSTMAAAATSGLSPLQLQKGHVSH
PQINPRLKGLSDRFGRSLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSAPQPP
NTAGAVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPASK
TSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQR
EQQQQQPHGVDGKLSSMNNMGLNNCRNEKITGANPTERRCAVPPGRLPGTGFLSLQERTR
FENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEA
RVYRDARSRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQ
EKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFF
TVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTD
GGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggtaagagaaagccgtattgaagagtgg
aagagcagccacttcataagaatgtcttccaagcaagccacctctccatttgcctgtgca
gctgatggagaggaagccatgacccaagatttgacctcaagggaaaaggaagagggcggt
gatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaagatgctgactgggacactgttctg
tcgtctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaaggaagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaattaaaggtacacctgagagcctggcagagaaagaacggcaactctctact
atgattacccagctgatcagtttacgggagcagctcttggcagcgcatgatgaacagaaa
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcagcagcagcacaaaattaatctc
ctgcagcaacagatccagcaggttcagggtcacatgcctccgctcatgatcccaattttt
ccacatgaccagcggaccctggcagcagctgctgccgcccagcagggcttcctcttcccc
cctggaataacatacaaaccaggtgataactaccctgtacagttcatttcatcaacaatg
gcagctgctgctacttctggactcagccctttacagctccagaagggtcatgtctcccac
ccacaaattaacccaaggctaaagggcctaagtgaccgttttggcaggagtttggacacc
tttgaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgct
cagctggccagcatgcaggtgtcacctggagcaaagatgccatcagctccacagccacca
aacacagcaggggcagtctcacctaccgggataaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggacgaagcagcagcacagccgctaaatctctcttcccgacccaag
acagccgagcctgtaaagtccccaacatctcccacccagagtctcttcccagccagcaaa
accagccccgttaatctgcctaacaaaagcagcatccccagccccattggaggaagtttg
ggaagaggatcctctttagatatcctgtccagtctcaactcccctgccctgtttggagat
caggacacagtgatgaaagccattcaggaggctcggaagatgcgagaacagatccagcgg
gagcaacaacagcaacagccacatggtgttgatgggaaactatcttccatgaacaatatg
gggctgaacaactgcaggaatgaaaagattactggagcaaatcccactgagagaagatgc
gcagtgccgcccggcaggcttcccggcacaggtttcctttccttacaggaaagaacacgc
tttgagaatttggggccccagttaacaggaaagtcaagtgaagatggaaagctgggccca
ggtgtcatcgatcttactcggccagaagatgcagagggaagtaaagcaatgaatggctct
gcagctaaactacagcagtattattgttggccaacaggaggcgccactgtggctgaagca
cgagtctacagggatgcccgcagccgggccagcagcgagccacacatcaagcgaccaatg
aatgctttcatggtttgggcgaaggatgagaggaggaaaatccttcaggccttccccgac
atgcataactccaacattagcaaaatcttagggtctcgctggaaatccatgtccaaccaa
gagaagcaaccttactatgaagagcaggcccggctaagcaagatccacctagagaagtac
ccgaactataaatacaaacctcgaccgaaacgcacctgcattgttgatggcaaaaagctc
cggatcggggaatataagcaactgatgaggtctcggagacaggagatgaggcagttcttt
accgtggggcaacagcctcagattccaatcaccacaggaacaggtgttgtgtatcctggt
gctattactatggcaactaccacaccgtcacctcagatgacatctgactgctctagcacc
tcggccagcccagagcccagcctcccagtcatccagagcacttatggtatgaagacagac
ggcggaagcctagctggaaacgaaatgattaatggagaggatgaaatggaaatgtatgac
gactatgaagatgaccccaaatcagactatagcagtgaaaatgaagccccggaagctgtc
agtgccaactga
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