Prionailurus viverrinus (fishing cat): 125176545
Help
Entry
125176545 CDS
T09889
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04136
Autophagy - other
pviv04140
Autophagy - animal
pviv04211
Longevity regulating pathway
pviv05010
Alzheimer disease
pviv05014
Amyotrophic lateral sclerosis
pviv05016
Huntington disease
pviv05017
Spinocerebellar ataxia
pviv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125176545 (ATG13)
04136 Autophagy - other
125176545 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
125176545 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125176545 (ATG13)
05014 Amyotrophic lateral sclerosis
125176545 (ATG13)
05016 Huntington disease
125176545 (ATG13)
05017 Spinocerebellar ataxia
125176545 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
125176545 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125176545 (ATG13)
03029 Mitochondrial biogenesis [BR:
pviv03029
]
125176545 (ATG13)
Membrane trafficking [BR:
pviv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125176545 (ATG13)
Atg1 complex
125176545 (ATG13)
Mitochondrial biogenesis [BR:
pviv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125176545 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125176545
NCBI-ProteinID:
XP_047734117
LinkDB
All DBs
Position
D1:99054531..99108658
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGG
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGARCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDVDPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatccccgacgggttcagactggttcaatttagcaatcaaagatatcccagag
gttacacatgaagcaaaaaaggccctggcaggacagctgcctgccgttgggagatcgatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagattaaagtttcctacacggtgtacaacaga
ctgtcactgctgctgaagtccctccttgccataactagggtcacaccggcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggtttaggagaaggtttccagacagtgcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccgtat
cccagctcctcacctatgcacccctgcaattacagaactgctggtgaggacactggagga
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttctccacctcccct
ccttcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctcatggttcctgggaaggaa
ggtggggtacccctcgctcccaaccagcctgcacacggtgctcaggccgaccaggagaga
ttggcaacctacaccccttctgatggggcccgctgtgctgccacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcttccccccatgatgtcttggaa
accatctttgtccgaaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaatttggagttggaggatgtc
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggtagcagtggcaatacccacgatgactttgttatgatc
gacttcaaaccggctttttctaaagatgacattcttccgatggatttggggaccttctat
cgtgaatttcaaaatccccctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gaatttgatgcctttgtagaaactctgcagtaa
DBGET
integrated database retrieval system
