Pseudescherichia vulneris: LMA04_00395
Help
Entry
LMA04_00395 CDS
T08658
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00061
Fatty acid biosynthesis
pvj00071
Fatty acid degradation
pvj01100
Metabolic pathways
pvj01212
Fatty acid metabolism
pvj02024
Quorum sensing
pvj04146
Peroxisome
Module
pvj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LMA04_00395 (fadD)
00071 Fatty acid degradation
LMA04_00395 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LMA04_00395 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMA04_00395 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvj01004
]
LMA04_00395 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvj04147
]
LMA04_00395 (fadD)
Enzymes [BR:
pvj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LMA04_00395 (fadD)
Lipid biosynthesis proteins [BR:
pvj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LMA04_00395 (fadD)
Exosome [BR:
pvj04147
]
Exosomal proteins
Exosomal proteins of breast milk
LMA04_00395 (fadD)
Exosomal proteins of breast cancer cells
LMA04_00395 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WAH54570
LinkDB
All DBs
Position
73359..75044
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPADINPDRYQSLVELFETATVRYADQPAFTNMGETMTFRKLEERSRA
FAAWLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVDKTQVQHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYHL
PDAISFRQALHNGYRMQYVKPEIVADDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHRGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSTLHLSAGGGMPVQQAVAERWVKLTGQYLLEGYGLT
ECSPLVSVNPHDIDYHSGSIGLPVPSTEVKLIDDVGKEVPHGDPGELCVKGPQVMLGYWQ
RPDATDEIIKDGWLMTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSSSSGEKVKIFVVKKDPSLSEEALITFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaatcgttatcccgccgacgtgccagcggatatcaaccccgat
cgctatcaatcccttgtggaactcttcgaaactgccacggtgcgctacgcggaccagccg
gcatttaccaacatgggcgagaccatgaccttccgcaagctggaggagcgcagccgcgcc
tttgccgcctggctccagcaggggctggggttaaagaagggggatcgcgtggcgctgatg
atgcccaacctgctgcagtatccggtggcgctgtttggtattttgcgtgccggtatggtg
gtggtcaacgttaacccgctctataccccgcgcgagctagagcatcagctcaacgacagc
ggcgcggcggctatcgtcatcgtctctaactttgcccatacccttgaaaaggtggtagac
aaaacccaggtgcagcacgtgattttgacccgcatgggcgatcagctctctgcggcgaag
gggacgctggtcaacttcgtggtcaaatacgttaagcggctggtgccaaaatatcacctg
ccggatgccatctcgtttcgccaggcgctgcacaacggctatcggatgcagtacgtcaag
ccggagattgttgcggacgatctcgctttcctgcaatacaccggtggcaccaccggcgtg
gccaaaggggcgatgctcacccaccgtaacatgctggctaacctcgagcaggtgaacgcc
acctacgggccgctgctgcaccggggaaaagagctggtggtcaccgcgctgccgctgtac
cacatctttgccctgaccatgaactgcctgctgtttatcgaactgggcgggcagaatctg
ctgatcaccaacccgcgcgatattccaggcctggtaaaggagctggcgaagtaccccttt
accgccatgaccggggtcaacacgctgtttaacgcgctgctgaacaacaaagagtttcag
cagctcgatttctctacgttgcacctctccgcaggcggcgggatgcctgttcagcaggcg
gtcgctgagcgctgggtgaagcttaccgggcagtatcttctcgagggctatggcctgacg
gagtgctctccgctggtcagcgtgaacccgcacgatattgactaccacagcggcagcatc
ggcctgccggtgccctctacggaggtgaagctgatcgacgacgtgggcaaagaggtgccg
cacggcgacccgggcgagctgtgcgtgaaggggccgcaggtgatgctgggttactggcag
cgccctgacgccaccgacgagatcatcaaggatggctggttgatgaccggcgatatcgcg
gtgatggacgatgaaggcttcctgcgcatcgtcgaccgcaagaaagatatgatcctggtc
tccggcttcaacgtctatcctaacgagatcgaagacgtcgtgatgcagcatcctggcgtg
caggaggtggccgccgtcggcgtgccgtccagcagcagcggggaaaaggtaaaaatcttc
gtagtgaaaaaagatccgtccctcagcgaagaggcgctgatcaccttctgccgccgccag
cttaccggctataaggtaccgaagctggtggagtttcgtgatgagctgccgaaatccaac
gtcggcaaaattttacggcgagaattacgtgacgaagcgcgcggcaaagtagacaataag
gtctaa
DBGET
integrated database retrieval system
