Entry |
|
Symbol |
rnd
|
Name |
|
KO |
|
Organism |
pvj Pseudescherichia vulneris
|
Brite |
KEGG Orthology (KO) [BR:pvj00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:pvj03016]
LMA04_00400 (rnd)
Enzymes [BR:pvj01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LMA04_00400 (rnd)
Transfer RNA biogenesis [BR:pvj03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LMA04_00400 (rnd)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
75127..76242
|
AA seq |
371 aa
MITTNDALAAMSEAARAFPALAIDTEFVRTRTYYPQLGLIQVYDGQQVSLIDPLEITDWA
PFRELMMDPAVTKFLHAGSEDLEVFLNVFGALPQPLIDTQILAAFSGRPLSWGFASMVEE
YTGLALDKSESRTDWLARPLTERQCDYAAADVWYLLPIAHKLMAETEAAGWLPAALDECR
LMQVRRQEVLAPEEAWREISNAWQLRTRQLACLQLLAAWRLRKARERDLAVNFVVREENL
WAVARYMPGSLGELDSIGLSGSEIRFHGKTLLAMVAQAQALPEEALPEPLLNLLDMPGYR
RAFKAIKALVQEVSVAKGVSAELLASRRQINQLLNWHWNIKPFATLPELISGWRGELMAS
SLQALLLEFPR |
NT seq |
1116 nt +upstreamnt +downstreamnt
atgatcaccaccaacgacgcgctggcggccatgagcgaggcggcgcgtgcctttccggct
cttgccatcgacaccgaatttgtccgcacccgcacctactatccgcagctgggcctgatc
caggtttacgacggccagcaggtttcgctgatcgatccgctggagatcaccgactgggcg
ccgttccgcgagctgatgatggatcccgcagtgactaagtttctccacgccggcagtgaa
gatctggaagttttcctcaacgtgtttggcgcgctgccgcagccgctgatcgatacccaa
attcttgctgctttcagcggccgcccgctgtcatggggctttgcctctatggtggaggag
tataccggtctggcgctggataaaagtgaatcccgcaccgactggctggcgcgtccgctg
accgagcgccagtgcgactacgccgcagccgacgtctggtatctgctgcccatcgcccac
aagctgatggcggagaccgaggctgcaggctggctgcccgccgcgctagacgagtgtcgt
ctgatgcaggtgcgccgtcaggaggtgctggcgccggaagaggcgtggcgcgaaattagc
aacgcctggcagctgcgtacccgtcagctggcctgcctgcagctgctggcggcgtggcgt
ctgcgtaaggcgcgcgaacgcgatctggcggtaaactttgtggtgcgggaagagaacctg
tgggcggttgcgcgctatatgccgggcagcctcggcgagctggacagcattgggctctcc
gggagcgagatccgcttccacggtaaaacgctgctggcgatggtcgctcaggcccaggcg
ttgccagaggaggcgctcccggagccgctgcttaacctgctggatatgccgggctatcgc
cgggccttcaaggcgattaaggcgctggtgcaggaggtgagcgtggcaaaaggggtaagc
gccgagctgctggcttcgcgtcgacaaataaatcagctgcttaactggcactggaatatt
aaaccgtttgccactttgccggaacttatctccggctggcgcggtgaattaatggcgtcg
agcctgcaggctctgctgctggaatttccccgctag |