KEGG   Pseudescherichia vulneris: LMA04_04890
Entry
LMA04_04890       CDS       T08658                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pvj  Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:pvj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvj03400]
    LMA04_04890 (helD)
Enzymes [BR:pvj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMA04_04890 (helD)
DNA repair and recombination proteins [BR:pvj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LMA04_04890 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: WAH53384
LinkDB
Position
complement(968918..970972)
AA seq 684 aa
MELKATSLGKRLAQHPYDRAVMLHAGVKVSGDRHEYLIPYNQLLAIVCKRGLVWGELEFV
LVDDKVVRLHGTEWAQTQQFWQHLNAHWQAWSSQMSEVAAGVLQETVATLSSGMKANRWL
TRQQTTGLQDRIRNAFAALPLPLARLDEFDNCREAWQQCQSWLVDVEASRAAHNREYTRK
MLVQYAPFFASVESSPLNPAQAEAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLMRGEAA
ADQILLLAFGRKAAQEMDERIRERLNTDEIAAQTFHALALAIIQHGSKKVPTISALENDT
DARQALFIEAWQQQCSEKKAQAKGWRQWLEEELAWEVPEGHFWDDTALQRRLAGRLDRWV
SLMRMHGGAQAEMIASAPEEVRNLFSKRVKLMAPLLKAWKTALKAENAVDFSGLIHQAIN
ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSNTTLFAVGDDWQAIYRFSGAQL
SLTTAFHHYFGEGESCVLDTTYRFTHRIGDVANRFIQQNPHQLRKPLNSLAAGEKSAVTL
LAEDRLDALLDKLSGYAKPDERILLLARYHYLKPVVLEKAATRWPELTLDFMTIHASKGQ
QADYVIVLGLQEGKEGFPAPARESIMEQALLPAPEDYPDAEERRLLYVALTRARKRVWLL
FNKDAPSPFVEDLKQLGVTVVRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcgacttcactcggaaaacgtctggcccagcacccctacgatcgggcg
gtcatgctccacgcgggcgtgaaggtttccggcgatcgccatgagtatcttattccctat
aatcaactcctggcgatagtctgcaagcgcgggctggtttggggggagctggagtttgtg
ctggtcgatgacaaagtcgtgcgcctgcacggcaccgagtgggcgcagacccagcagttc
tggcagcatcttaacgcccactggcaggcatggagcagccagatgagcgaggtggccgcg
ggcgtgctgcaggagacggtggcgaccctctccagcggcatgaaggccaacaggtggcta
acccgccagcagaccacgggcctgcaggatcggatccgtaacgcctttgcggcgctgccg
ctgccgctggcccgtctcgatgagttcgataactgccgcgaggcgtggcagcagtgccag
agctggctggtagatgttgaagccagccgggcggcacataaccgggagtacacccgtaaa
atgctggtgcaatatgcgcctttctttgccagcgttgaatcttcaccgcttaaccctgcc
caggcggaagcggtggtaaacggcgagcagtcgctgctggtactggccggggctggcagc
ggcaaaacttctgtgctggtggcccgcgcgggctggctgctgatgcgcggtgaagcggca
gcagatcagatcctgcttctggcctttggccggaaagccgctcaggagatggacgaacgt
attcgcgagcggctgaacaccgatgagatcgccgcccagaccttccatgccctggcgctc
gctattattcaacacggcagtaaaaaggtacccactatcagcgcgctggagaacgatacc
gacgcccgtcaggcgctgtttatcgaagcctggcagcagcagtgcagcgagaaaaaggcc
caggcgaagggctggcggcagtggctggaggaggagctggcatgggaggtccccgaaggt
catttctgggacgataccgcattgcagcgtcgccttgccggacggcttgaccgttgggtc
agcctgatgcgtatgcacggcggcgcgcaggcagagatgatcgcctctgcgccggaagag
gtgcgtaacctgttctcaaaacgggtgaagcttatggctccgctgctgaaggcgtggaaa
acggcgctgaaggcggaaaacgccgtcgacttctccgggctgattcaccaggcgatcaat
attctggagaaagggcgctttatcagcccgtggaagcatattctggtggatgagttccag
gatatctctccccaacgcgcggcgctgctggcagccctgcgcaagcagaattcaaacacc
acgctctttgccgtcggcgacgactggcaggccatctaccgctttagcggggcgcagctc
tctctgaccaccgcctttcatcactactttggcgagggggagagctgcgtgctggatacc
acctaccgctttacccatcgcattggcgacgtggccaaccgttttatccagcagaatccg
caccagctcagaaagccgctgaacagcctggcggcaggcgagaagagcgccgtaacgctg
ctggctgaggatcggctcgatgccctgctggataagctcagcggctatgcgaagccagac
gagcggatcctgctgctggcgcgctatcactatctgaaacccgtggtgctggagaaggcc
gcgacccgttggccggagttaacgctcgactttatgaccatccacgccagcaagggtcag
caggcggactatgtgattgtgctgggtctgcaggaggggaaggagggctttccggccccg
gcgcgggagtccattatggagcaggcgttgctgcccgcgccggaggattacccggacgcg
gaagagcgacgtctgctctacgtcgccctgactcgcgcccgcaagcgcgtctggctgctg
tttaataaagatgcgccgtcgccgtttgtggaagatttgaagcagttaggcgtaacggtg
gttcgcaaaccgtga

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