Pseudescherichia vulneris: LMA04_06185
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Entry
LMA04_06185 CDS
T08658
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00330
Arginine and proline metabolism
pvj00480
Glutathione metabolism
pvj01100
Metabolic pathways
pvj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LMA04_06185 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LMA04_06185 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LMA04_06185 (speF)
Enzymes [BR:
pvj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LMA04_06185 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WAH53625
LinkDB
All DBs
Position
1261763..1263922
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AA seq
719 aa
AA seq
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MQRLKIAASRACHEFISTRRDIVDLHNSNFIDVAAAVLSINDIHKGMVEKIEETGFTIPV
FVMTHEAEFVPANYLPDIYGVFHYGNANREYYSRQLEAAALKYERGLRPPFFSALTDYVK
QGNSAFDCPGHQGGQFFRRHPAGNQFVDFFGEALFRADLCNADVAMGDLLIHEGAPCLAQ
QHAAKVFNADKTYFVLNGTSSANKVVLNALLAPGELVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEEPYLRGLVAEVSPEHAERQRPFRLAVIQLGTYDGTIYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQPRYVPHKRLNNAFMMHASTSPFYPLFAALDVNARMHEGESGKRM
WMRCVEQGVEARKMILDQCRFIRPFVPTTVDDRPWDSYKTAEIARDLRFFHFVPGENWHA
FEGYAPHQYFIDPCKLLLTTPGIDAATGEYEEFGVPATILANYLRENGVVPEKCDLNSIL
FLLTPAEDMGKLQQLVARLAQFETLLASDAPLQEVLPSIYHQHPERYAGYTLRQLCQEMH
DLYARNNVKQLQKEMFRKACLPPVRMSPQEANYAFIRGESELVLLSEAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVLRYFTALEEGINLLPGFAPELQGVYIQEHEGRKSVWCNVIKR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcttgaaaatagcggccagccgggcctgccacgaatttatctctacccgccgt
gatattgtcgatctgcacaacagcaactttatagacgttgccgccgccgtactctctatt
aatgacatccataaagggatggtagagaagatagaggagaccggatttactattcctgtt
tttgttatgacccacgaggcggaatttgtcccggcaaactacctgccggatatttacggc
gtctttcactatggtaacgccaaccgggagtattatagccgtcagcttgaggccgccgcg
ctgaaatatgagcgtgggctgcgtccgccctttttcagtgccctgacggactatgtgaag
cagggcaacagcgcctttgactgcccgggccaccagggcgggcaatttttccgtcgccat
ccggccggcaaccagtttgtggatttctttggcgaagcgctgttccgggcggatctctgc
aatgctgacgtggcgatgggcgatctgttgatccacgaaggcgcaccctgtctggcccag
cagcatgcggctaaggtgtttaacgccgataagacctacttcgttctcaacggcacctcg
tcagccaataaagtcgtccttaacgccctgctggcgccgggagagctggtgctgttcgac
cgcaacaaccacaagtctaaccaccacggagcgctgctgcaggcgggcgccacgccggtc
tacctggagacggcgcgtaacccctatggctttattggcggcatcgatgcgcactgtttt
gaagagccgtacctgcgcgggctggtagcggaggtctcgcctgaacatgcagagcgtcag
cgtccattccgcctggcggtgatccagctcggcacctatgacggcaccatctacaacgct
cgccaggtggtggacagcattggccacctctgcgactacatcctgtttgactctgcctgg
gtgggctacgaacagtttatccccatgatggccgactgctcgccgctgctgctggatctc
aacgagaacgatcccggcattctggtgacccagtcggtgcacaagcagcaggcaggcttc
tcccagacctcgcagatccataaaaaagatagccatatcaagggtcagccgcgctacgtt
ccacacaagcgcctgaacaacgcctttatgatgcacgcctccaccagccccttctatccg
ctctttgccgccctggacgttaacgcccgcatgcacgagggtgagagcgggaaacggatg
tggatgcgctgcgttgagcagggcgtcgaggcgcgcaagatgatcctcgatcagtgccgg
tttatccgcccgtttgttccgacgaccgtagacgatcgtccgtgggactcttataaaact
gccgaaattgcccgcgatctgcgcttcttccacttcgtacccggcgagaactggcacgcc
tttgagggttatgccccgcaccagtactttatcgatccctgcaaactgctgctgactaca
ccgggcatcgatgcggccaccggcgaatatgaggaatttggcgtcccggcgaccattctc
gccaactatctacgtgaaaacggcgtggtgccggagaagtgcgatcttaactccatcctc
ttcctgctgacgcctgcggaagatatgggcaagctgcagcagctggtggcccggctggcg
cagtttgaaacgctgctggccagcgatgcgccgctgcaggaggtgctgccctcaatctac
catcagcacccggagcgctacgccggttacaccctgcgtcagctctgccaggagatgcac
gacctctatgcacgcaacaacgttaagcagctgcagaaagagatgttccgtaaagcctgc
ttaccaccggtgcgcatgtcgcctcaggaggccaactacgcctttattcgcggcgagagc
gaattggtgctgttgagcgaggcagagggacggatcgccgccgaaggcgcgctgccctat
ccgccgggcgtactgtgcgtggtaccgggtgaggtctggggaggtgccgtactgcgctac
tttaccgcgcttgaggaggggatcaacctgctgccaggcttcgcgccggagctacagggg
gtctacattcaggagcacgaggggcgcaagtcggtgtggtgtaacgtgatcaaacggtaa
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