Pseudescherichia vulneris: LMA04_08025
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Entry
LMA04_08025 CDS
T08658
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03030
DNA replication
pvj03430
Mismatch repair
pvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMA04_08025 (dnaQ)
03430 Mismatch repair
LMA04_08025 (dnaQ)
03440 Homologous recombination
LMA04_08025 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvj03032
]
LMA04_08025 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_08025 (dnaQ)
Enzymes [BR:
pvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMA04_08025 (dnaQ)
DNA replication proteins [BR:
pvj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMA04_08025 (dnaQ)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMA04_08025 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
WAH53964
LinkDB
All DBs
Position
complement(1652277..1653008)
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AA seq
243 aa
AA seq
DB search
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPLFSDVADEFIDYIRGAELVIHNASFDIGFMDYEFSKLNRGIPK
TDTFCKVTDSLAMARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILADVFLMMTG
GQTSMAFSVEGENQQAQGEATIQRVARRANALRVVLASDEEVMAHESRLDLVQKKGGSCL
WRA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcaattacacgacagatcgtccttgatacagaaaccaccggtatgaaccag
atcggtgcccactatgaaggacataagattattgaaatcggcgcggtagaggtgatcaac
cgtcgcctgaccggcaataacttccacgtctaccttaagccggatcggctggtggatccg
gaagcctttggcgtgcacgggattgcagatgagtttttgctggataagccactgtttagc
gacgttgccgacgagtttatcgactatattcgcggcgctgagttggtgatccataacgcc
tcgtttgatatcggctttatggactatgagttcagcaagctgaaccggggtattcccaaa
acggacaccttctgtaaggtgaccgatagcctggcgatggcaaggaagatgtttcccggc
aagcgcaacagcctggatgccctctgctcgcgctatgagatagataacagcaagcgaacg
ctgcacggggcactgctcgatgcccagatccttgctgacgtcttcttaatgatgacgggc
gggcagacgtcaatggctttctccgttgagggtgaaaaccagcaggcacagggcgaagcc
actattcagcgcgttgctcgccgggcaaatgcactgcgtgtggtgttagccagcgatgaa
gaggtgatggcacatgaatcgcgcctcgatctggtgcagaagaagggcggatcctgcctg
tggcgggcgtga
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