Pseudescherichia vulneris: LMA04_08350
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Entry
LMA04_08350 CDS
T08658
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvj03016
]
LMA04_08350 (thpR)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LMA04_08350 (thpR)
Transfer RNA biogenesis [BR:
pvj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LMA04_08350 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WAH54022
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All DBs
Position
1724793..1725323
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AA seq
176 aa
AA seq
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MSEPKRLFFAVALPEEIQRQIIHWRAAHFAPEAGRPIEAANLHVTLAFLGEVGEEKQRAL
SQLAGRIRQPGFTLTLDDAGQWLRSRVVWLGTRKPPRGLLQLANLLRAQAARSGCYQSPQ
PFHPHVTLLRNASHAVAIPPPGFSWSFPVNEFVLYESHFSRGRTRYTPLERWRLAE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccaaaaaggctgttcttcgccgttgcgctgcccgaggagatccagcggcag
attatccactggcgggcggctcattttgcgccggaggccggacgccccatcgaggcggca
aatctccatgtaacgctggcttttctcggcgaggtcggcgaggagaagcagcgcgccctg
agccagcttgccggacgcatccgccagccgggctttaccctgaccctggacgatgccggg
cagtggctacgctcgcgggtggtctggcttggcacgcgcaagccgccgcgcggcctgttg
cagctggccaacctgctgcgtgcccaggccgcccgcagcggctgctatcaaagtccgcag
ccgtttcaccctcacgtgacgctactgcgcaacgccagccacgcggtggcgattccgccg
ccggggtttagctggtcctttcccgttaacgaatttgtgctgtatgagtcgcacttttcc
cgagggcgcacccgttacacgccgctggagcgctggcggctcgctgaataa
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