KEGG   Pseudescherichia vulneris: LMA04_10115
Entry
LMA04_10115       CDS       T08658                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pvj  Pseudescherichia vulneris
Pathway
pvj02020  Two-component system
pvj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pvj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LMA04_10115 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LMA04_10115 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvj03021]
    LMA04_10115 (rpoN)
Transcription machinery [BR:pvj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LMA04_10115 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: WAH54337
LinkDB
Position
2085729..2087162
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDAQQ
SQDTEALDSADALEQKDMPEELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLEDILDSMGDSNVGLDEVEAVLK
RVQRFDPVGVAARDLRDCLLIQLSQFASDTPWRAEAKLIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLQIN
QHYAAMCSGTRNDADSQYIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDKGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactacggctaagccaacagctcgccatgacgccccaactgcaa
caggctattcgtctgttgcagctctcgacgctggaacttcagcaagaacttcagcaggcg
ctggatagcaacccgctgctggagcaaaccgatcttcacgacgaggtagacgcccagcag
tctcaggacaccgaagcgttagactccgccgacgcccttgagcagaaagatatgcccgag
gagctgccgctggatgccagctgggatgagatctacaccgccggtacgccatctggcaac
ggcgtggactatcaggacgatgagcttcccgtctaccagggcgaaaccacccagtcgctg
caggactacctgatgtggcaggtggagctgacgcccttctccgataccgatcgcgctatt
gcgacctccattgtcgacgccgtggatgagaccggctacctgaccgtctcgctggaagat
atcctcgacagcatgggcgacagcaacgtgggtctggatgaggtcgaggcggtactgaaa
cgcgtccagcgtttcgatccggtgggcgtggcggcacgggatctgcgcgactgcctgctg
atccagctctcccagttcgccagcgataccccgtggcgggccgaagccaaactgatcatc
agcgatcacctcgatctgctggcaaaccacgatttccgcaccctaatgcgcgtgacccgc
ctgaaggaagaggtgctgaaagaggcggtgaatctgatccagtccctggatccgcgcccc
ggccagtcgatccagaccggtgagccggagtatgtgatccccgacgtgctggtacgcaag
cataatggccgctggacggtagagctgaacgctgacagcattccgcgcctgcagattaac
cagcactacgctgccatgtgcagcggcacgcgcaacgatgccgacagccagtatatccgc
agcaatcttcaggaagccaaatggctgattaagagcctggagagccgcaacgataccctg
ttgcgcgtcagccgctgcatcgtggaacagcagcaggcctttttcgacaaaggcgaagag
tttatgaaaccgatggtgctggcggatattgcccaggccgtcgagatgcatgaatccacc
atttcacgcgtgacaacccagaaatacctgcacagcccgaggggcatttttgagcttaaa
tactttttctccagccacgtgaataccgaaggcggcggcgaagcctcttctacggctatt
cgcgcgctggtgaagaagctgatagccgcagaaaaccctgcgaaaccactgagcgacagt
aaactgaccaccctgctgtccgaccagggtatcatggtggcgcgccgtaccgttgcgaag
tatcgagagtctttatccatcccgccgtctaaccagcgcaagcagctggtgtga

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