Pseudescherichia vulneris: LMA04_11480
Help
Entry
LMA04_11480 CDS
T08658
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LMA04_11480 (hmsP)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LMA04_11480 (hmsP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
T4_deiodinase
UL41A
Motif
Other DBs
NCBI-ProteinID:
WAH50776
LinkDB
All DBs
Position
complement(2362536..2364539)
Genome browser
AA seq
667 aa
AA seq
DB search
MRVSRSLTIKQMAMVSIVAMVFIFLFCVILLFHFVQQNRYNTGTQMESIARSVREPLSAA
ILKGDIADAEAILKRIQPAGVVSRADVVLPNQFQALRMSFIPERPVPVTITRLFELPVQI
SLPIYSLERPANPQPLAYLVLQADSFRMYKFVMSTVSTLVTTYLLLVLIMTVALTWCISR
LIIRPLRKIARELNDLSLQDHPGHQLALPRHHHDDEIGMLVRSYNRNQQMVLRQHEELNS
QVTRFPVSELPNKAFMMALLEQTVARQKTTALMVIACETLQDTAGVLKESQREMLLLTLV
EKMKSVLAPRMVLAQASTDTFVIIGNGASEPWHAITLGQQILAVINERLPVQGIQLRPSA
SIGIAMFYGDATAEQLYRRAISAALSARRKGKNQIQFFDPEQMITAQKRLTEESDILNAL
DNHQFAIWLQPQVNLATGEVVSAEALLRQQQPDGSWELPEGLIDSIESCGLMIVVGHWVL
EESCRQLAAWQARGIMLPLSVNLSALQLMHQDMVRDLLELLERYRIAPGTLILEVTESRR
IDDPHAAVAILRPLRDAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKIFVEGLPED
SSMVSSIIHMARSLDLNVIAEGVETEAQRAWLQAAGVEMAQGYLFGRAVAPEAFEQHNLP
RLVDGNA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgttagccgttcgttaaccattaaacagatggcgatggtctcgatcgtcgctatg
gtgtttattttccttttttgcgtgattttgctgttccattttgtgcagcagaatcgctac
aacaccggtacgcagatggagagcatcgcgcgctcggtgcgtgagccgctgtccgccgct
attctgaagggcgacattgccgacgcggaggctatccttaaacgcatccagcccgctggc
gtagtcagccgggcagacgttgtcctgccgaatcagtttcaggcgctgcgcatgagcttc
atccccgagcgcccggtgcccgtgaccattacccggctctttgagctaccggtacagatt
tcattgcctatctactctctggagcgtccggctaacccccagccgctggcctatctggtg
ctgcaggcggactcattccgcatgtataagttcgtgatgagcaccgtttcaacgttagtt
actacttacttactgctggtcctgatcatgacggtggcgctcacctggtgcatcagccgg
ctgatcatccgcccgctgcgcaagatcgcccgtgagctgaacgacctgtcgctacaggac
cacccaggacaccagctggcgctgccccgtcaccatcatgacgatgagattggcatgctg
gtgcgcagctataaccgtaaccagcagatggtgctgcgccagcatgaagagctaaatagc
caggtgacgcgctttccggtatcagagctaccgaacaaagcctttatgatggccctgctg
gagcagaccgttgcacggcaaaaaacgaccgcattgatggttattgcctgtgagaccttg
caggacaccgcgggggtgctaaaagagagccagcgcgaaatgctgctcctgacgctggtg
gagaagatgaagtcggtgctggccccgcgcatggtgctggcccaggcgagtacggatacc
tttgtgattattggtaacggcgccagcgagccgtggcatgccattacgctgggtcagcag
atactcgctgttatcaatgagcgtctgccggtgcagggcattcagctacgcccgagcgcc
agcatcggcatcgccatgttctatggcgatgcgacggcggagcagctctaccgtcgggct
atctcagcggcgctctccgcccggcgcaagggtaaaaaccagatccagttctttgacccg
gagcagatgatcacggcacagaagcggctgacggaagagagtgatatcttaaacgcgctg
gataaccaccagtttgccatctggttgcagccgcaggtcaacctggccaccggcgaggtg
gtcagcgccgaggccctgctgcgccagcagcagccggacggcagctgggagctgccagag
gggctgattgacagcatcgagtcatgcggactgatgattgtcgtcggccactgggtgctg
gaggagtcctgccgccagcttgcggcctggcaggcgcgaggcattatgctgccgctgtcg
gtgaacctctcggcgctgcagctgatgcaccaggatatggtgcgggatctgcttgagctg
ctggaacgctaccgtattgcgcccggcacgctgatcctcgaggtgaccgaaagccgccgc
attgacgatccgcacgcggcggtggcaatcctgcgcccgctgcgcgatgccggggtgcgt
attgcgctggatgacttcggcatgggctatgcaggcctgcgccagcttcagcacatgaaa
tcgttgccggtggatgtgctgaaaatcgacaaaatttttgttgaaggtctgccggaagac
agcagcatggtctcatcgatcattcatatggcccgcagcctcgatctgaatgttatcgct
gagggagtggagaccgaggcgcagcgcgcgtggctgcaggcggcaggggttgaaatggct
cagggttatctctttggccgcgcggtggccccggaggcatttgagcagcataatcttccc
cgtctggttgacggtaacgcgtag
DBGET
integrated database retrieval system
